Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq16031 102 1e-16 >seq16031 Length=34897 Score = 102 bits (112), Expect = 1e-16 Identities = 157/223 (70%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 101311 ACAAATGAAAACGACATAGTAATGGACtttttttGCAGGAAGTGGCACTACCCTAGCTGT 101370 || |||||||| || ||||| | || |||| | ||| ||||| || || || Sbjct 1803 ACTAATGAAAATGATTTAGTATTAGA-TTTTCATCTAGGCAGTGGAACGACGTGTGCGAC 1745 Query 101371 TGCCCATAAAATGAAACGCAAATGGATAGGCATAGAACAAATGGATTATATAGAAACTAT 101430 ||| ||||||||| ||| || || || |||||||| ||||| ||||| | || Sbjct 1744 TGCTCATAAAATGGGACGTCGATATATTGGTATAGAACAGATGGACTATATCAATGAAAT 1685 Query 101431 CACAAAAGAAAGACTCAAAAAAGTCATAGAAGGTGAGCAAGGTGGTATCAGCAAAGCAGT 101490 || | | || |||||||||| |||||||||||||| || ||| |||| || Sbjct 1684 TACCGTACCTCGCCTACAAAAAGTCATTGAAGGTGAGCAAGGGGGGATCTCTAAAGATGT 1625 Query 101491 AAATTGGCAAGGTGGTGGAAGTTTTGTTTATGCTGAACTTATG 101533 || |||||||| ||||||||||| || || |||| |||||| Sbjct 1624 GAAATGGCAAGGCGGTGGAAGTTTCGTCTACACTGAGCTTATG 1582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584713035143640