Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019514.1
Length=74669
Score E
Sequences producing significant alignments: (Bits) Value
seq14401 129 3e-25
seq13667 109 3e-19
>seq14401
Length=13065
Score = 129 bits (142), Expect = 3e-25
Identities = 173/239 (72%), Gaps = 10/239 (4%)
Strand=Plus/Plus
Query 17083 TGGCCTTGGGCATAAATCTGGCATTGTACTTGGGAACCTGGTGGGTCTGATTGATTCGGA 17142
||| || || ||||| ||| ||||||||||| || |||||||| |||||||| || ||
Sbjct 12811 TGGACTGGGTCATAAGCATGGGATTGTACTTGGTAATCTGGTGGGCCTGATTGACTCAGA 12870
Query 17143 CTATCAGGGTGAGCTGAAGGTTTCCCTGTGGAACCGCAGCGCTGAACCA-----TACACT 17197
||||||||| ||||| | ||| || | |||||||| || | | || ||||||
Sbjct 12871 CTATCAGGGCGAGCTTATGGTATCTGTCTGGAACCGTAG---TCAGACAGTTTTTACACT 12927
Query 17198 GTCAGCCCTGGTGAGCGTGTTGCCCAAATGGTTATCGTGCCAGTAGTGCAGGCACAGTTT 17257
| | ||||||||||| | || ||| || | || || ||||| ||| |||| |||
Sbjct 12928 GGAA--CCTGGTGAGCGCCTAGCTCAATATGTACTGGTTCCTGTAGTCCAGACACAATTT 12985
Query 17258 GAGCTGGTTGATGAATTCACTGCTTCAGAACGTGGAGACGGCGGATTTGGCCACACCGG 17316
|| | || ||||||| |||| || || || ||| ||||| |||||||| |||||
Sbjct 12986 GAACAAGTGAATGAATTTACTGTATCCGAGCGGGGAACTGGCGGTTTTGGCCATACCGG 13044
>seq13667
Length=755
Score = 109 bits (120), Expect = 3e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 17048 GACCCTGGTTATGCTGCTGTGCTGCTGCCTCGCAGTGGCCTTGGGCATAAATCTGGCATT 17107
||||| ||| ||| || | ||||||| ||| ||||| || || || ||||||
Sbjct 312 GACCCGGGTCTTGCCGCACTCGTGCTGCCGCGCTCGGGCCTGGGCCACAAGCATGGCATC 253
Query 17108 GTACTTGGGAACCTGGTGGGTCTGATTGATTCGGACTATCAGGGTGAGCTGAAGGTTTCC 17167
|| || || |||||||| || ||||| ||||||||||| ||||| || |||| ||| ||
Sbjct 252 GTGCTGGGCAACCTGGTCGGGCTGATCGATTCGGACTACCAGGGCGAACTGATGGTGTCG 193
Query 17168 CTGTGGAACCGCAGCGCTGAACCATACACTGTCAGCCCT-GGTGAGCGTGTTGCCCAAAT 17226
||||||||| || | | | ||| || || | ||||||||| | ||||| |
Sbjct 192 TGCTGGAACCGCGGCACCACCGCCTTCACCATC-GCTGTCGGTGAGCGTATCGCCCAGCT 134
Query 17227 GGTTATCGTGCCAGTAGTGCAGGCACAGTTTGAGCTGGTTGA 17268
||| ||||||| || || ||||| ||||| ||| | || ||
Sbjct 133 GGTGCTCGTGCCCGTGGTACAGGCGCAGTTCGAGATCGTCGA 92
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238726607663590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |