Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq104 123 3e-23 >seq104 Length=6336 Score = 123 bits (136), Expect = 3e-23 Identities = 237/346 (68%), Gaps = 24/346 (7%) Strand=Plus/Plus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 ||||| ||||||||||| ||||| || || || ||||| |||||| | || | |||| Sbjct 535 AAAGGTATTATTTTAGCGGGTGGTTCAGGTACACGCTTACATCCAATTACCAAAGGTGTA 594 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCT- 139557 ||||||||| | || || | ||||||||||||||| |||||||||||||| ||| Sbjct 595 TCGAAACAGCTTTTGCCAATTTACGATAAACCAATGGTTTACTATCCATTG-----TCTG 649 Query 139558 TATCGAAGCT----GGTATAAACGAAATACTTA-TAATATCAACACCACAGGATAGAAAT 139612 ||| || ||| ||||| ||| | |||| | || || |||||| | ||| | Sbjct 650 TATTGATGCTTGCCGGTATTCGTGAAGT-CTTATTGATTTCGACACCAGAAGATTTACCC 708 Query 139613 TCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTT 139672 | || || | || ||| | ||||| ||||||||| || ||| || | Sbjct 709 CAATATGAAAAACTGCTCGGTGATGGTTCTCAATTTGGT------ATTGAACTTACTTAT 762 Query 139673 CAAGAAAAACCT------AATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATA 139726 ||| | ||||| ||||||| ||||| || || | || |||||||| || || Sbjct 763 AAAGTACAACCTTCTCCAGATGGTTTGGCACAGGCATTTTTAATTGGTGAAGAGTTTATT 822 Query 139727 GGTAAATCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATG 139772 ||| || ||| || | |||| || |||||||| |||| | ||| Sbjct 823 GGTCAAGATAATGTTTGTTTGATCTTGGGTGACAATATTTACTATG 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701592946251360