Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019521.1
Length=219372
Score E
Sequences producing significant alignments: (Bits) Value
seq104 123 3e-23
>seq104
Length=6336
Score = 123 bits (136), Expect = 3e-23
Identities = 237/346 (68%), Gaps = 24/346 (7%)
Strand=Plus/Plus
Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498
||||| ||||||||||| ||||| || || || ||||| |||||| | || | ||||
Sbjct 535 AAAGGTATTATTTTAGCGGGTGGTTCAGGTACACGCTTACATCCAATTACCAAAGGTGTA 594
Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCT- 139557
||||||||| | || || | ||||||||||||||| |||||||||||||| |||
Sbjct 595 TCGAAACAGCTTTTGCCAATTTACGATAAACCAATGGTTTACTATCCATTG-----TCTG 649
Query 139558 TATCGAAGCT----GGTATAAACGAAATACTTA-TAATATCAACACCACAGGATAGAAAT 139612
||| || ||| ||||| ||| | |||| | || || |||||| | ||| |
Sbjct 650 TATTGATGCTTGCCGGTATTCGTGAAGT-CTTATTGATTTCGACACCAGAAGATTTACCC 708
Query 139613 TCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTT 139672
| || || | || ||| | ||||| ||||||||| || ||| || |
Sbjct 709 CAATATGAAAAACTGCTCGGTGATGGTTCTCAATTTGGT------ATTGAACTTACTTAT 762
Query 139673 CAAGAAAAACCT------AATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATA 139726
||| | ||||| ||||||| ||||| || || | || |||||||| || ||
Sbjct 763 AAAGTACAACCTTCTCCAGATGGTTTGGCACAGGCATTTTTAATTGGTGAAGAGTTTATT 822
Query 139727 GGTAAATCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATG 139772
||| || ||| || | |||| || |||||||| |||| | |||
Sbjct 823 GGTCAAGATAATGTTTGTTTGATCTTGGGTGACAATATTTACTATG 868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 701592946251360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |