Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019522.1
Length=48454
Score E
Sequences producing significant alignments: (Bits) Value
seq5804 260 4e-65
>seq5804
Length=1936
Score = 260 bits (288), Expect = 4e-65
Identities = 444/636 (70%), Gaps = 12/636 (2%)
Strand=Plus/Minus
Query 22737 ATGTGGGCGTCATC-AGCATTCGAGAAAAAAGGCCGGACGGTTCTTGGTCAATGCGAAGA 22795
||||||||||| || ||| |||| || | ||||| || || || || || ||| |
Sbjct 1144 ATGTGGGCGTCGTCGAGC-TTCGCCAAGCAGGGCCGCACAGTCCTGGGGCAGGCCGAGCA 1086
Query 22796 AGTGATGATGCGTGCTGGTGGATGGCAAAAGTCGAGAATGGAACAGCAGATGCATGAATG 22855
|| | | || || ||||| ||||| ||| | | ||||| || ||||||| ||| ||
Sbjct 1085 GGTAGCGTTCCGCGCCGGTGGCTGGCAGAAGGCCCGGATGGAGCAACAGATGCGTGATTG 1026
Query 22856 GTTCGGGAGAATCCCAGCATTCATTATCACGCTGGCCGCTGACTATTGCGCGGAGTGCTC 22915
|||||| | | || || ||||| ||||| ||||| |||||||| ||||| |||||
Sbjct 1025 GTTCGGTGGTGTGCCGGCCTTCATCATCACCCTGGCTGCTGACTACTGCGCCCAGTGCAG 966
Query 22916 CGACTTGGATTTCTGCGCGCTGGTAGAACATGAGCTTTACCACATTTGCCACGCTACTGA 22975
|||| || ||||| || |||||||| |||||||| |||||||| ||||| || ||
Sbjct 965 CGACACCGACTTCTGTGCCCTGGTAGAGCATGAGCTGTACCACATCGCACACGCCACGGA 906
Query 22976 TGAATTCGGTGCTCCGAAATTTAAACGGGATACCGGATTGCCGGTGCTGAAAATGCGCGG 23035
| ||| ||| || |||| ||| ||| |||| |||| | ||||| ||
Sbjct 905 TAAATACGGCCAGCCAGCCTTTACCAAGGA---GGGAGCGCCGAAGCTGGAGATGCGTGG 849
Query 23036 TCACGATGTTGAGGAATTCGTTGGCGTCGTTCGCCGCTACGGTGCAAGCCGTGACGTGCA 23095
||||||||| ||||| ||||| || || || |||||||||||||| |||| |||||| ||
Sbjct 848 TCACGATGTCGAGGAGTTCGTCGGTGTGGTACGCCGCTACGGTGCGAGCCCTGACGTTCA 789
Query 23096 GGAAATGGTTGATGCGGCAAACAATAGGCCGGAAGTGGCTCACGTCGATGTGGCGAGGGC 23155
| |||| ||||| |||||||| | || |||| | | | | |||||||
Sbjct 788 AGCGTTGGTGGATGCAGCAAACAAACCCGCCGAGGTGGGGAAACTGAACATATCGAGGGC 729
Query 23156 ATGCGGAACGTGCTTATTAAAATTGGCGTGAAATTTTTGACTGATTAT-GACGAGTGGTG 23214
|||||||| || | | || |||| || ||| | ||| | | | |||| ||
Sbjct 728 TTGCGGAACCTGTCTGCTCAAGCTGGCCTG--ATTCTGGACAGGCTCTGGACGGATGAGA 671
Query 23215 ATTTATGGCGGTACT--AAAAGGACACGTTAAGTCATTCATTGTTCAGTCATTAGCCTGC 23272
|| |||||| | || |||| | |||| ||| | || ||||||||| | | || |||
Sbjct 670 ATCTATGGCAGCCCTTCAAAATG--ACGTGAAGGCCTTTATTGTTCAGGCCCTGGCGTGC 613
Query 23273 TTTGATACCCCATCTCAGGTGGTCGATGCCGTCAATAAAGAATTCGGCATTGCGATTACT 23332
|| || || || || ||||| || || || ||| | ||||||| || ||| | | ||
Sbjct 612 TTCGACACGCCTTCACAGGTCGTTGAAGCTGTCCAGAAAGAATATGGGGTTGTGGTAACC 553
Query 23333 CGGCAGCAGGTTGAATCTCATGACCCGACAAAGGCA 23368
|| |||||||| ||| | ||||| || || ||| ||
Sbjct 552 CGCCAGCAGGTGGAAACACATGATCCTACGAAGACA 517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154874693976896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |