Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq5804 260 4e-65 >seq5804 Length=1936 Score = 260 bits (288), Expect = 4e-65 Identities = 444/636 (70%), Gaps = 12/636 (2%) Strand=Plus/Minus Query 22737 ATGTGGGCGTCATC-AGCATTCGAGAAAAAAGGCCGGACGGTTCTTGGTCAATGCGAAGA 22795 ||||||||||| || ||| |||| || | ||||| || || || || || ||| | Sbjct 1144 ATGTGGGCGTCGTCGAGC-TTCGCCAAGCAGGGCCGCACAGTCCTGGGGCAGGCCGAGCA 1086 Query 22796 AGTGATGATGCGTGCTGGTGGATGGCAAAAGTCGAGAATGGAACAGCAGATGCATGAATG 22855 || | | || || ||||| ||||| ||| | | ||||| || ||||||| ||| || Sbjct 1085 GGTAGCGTTCCGCGCCGGTGGCTGGCAGAAGGCCCGGATGGAGCAACAGATGCGTGATTG 1026 Query 22856 GTTCGGGAGAATCCCAGCATTCATTATCACGCTGGCCGCTGACTATTGCGCGGAGTGCTC 22915 |||||| | | || || ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct 1025 GTTCGGTGGTGTGCCGGCCTTCATCATCACCCTGGCTGCTGACTACTGCGCCCAGTGCAG 966 Query 22916 CGACTTGGATTTCTGCGCGCTGGTAGAACATGAGCTTTACCACATTTGCCACGCTACTGA 22975 |||| || ||||| || |||||||| |||||||| |||||||| ||||| || || Sbjct 965 CGACACCGACTTCTGTGCCCTGGTAGAGCATGAGCTGTACCACATCGCACACGCCACGGA 906 Query 22976 TGAATTCGGTGCTCCGAAATTTAAACGGGATACCGGATTGCCGGTGCTGAAAATGCGCGG 23035 | ||| ||| || |||| ||| ||| |||| |||| | ||||| || Sbjct 905 TAAATACGGCCAGCCAGCCTTTACCAAGGA---GGGAGCGCCGAAGCTGGAGATGCGTGG 849 Query 23036 TCACGATGTTGAGGAATTCGTTGGCGTCGTTCGCCGCTACGGTGCAAGCCGTGACGTGCA 23095 ||||||||| ||||| ||||| || || || |||||||||||||| |||| |||||| || Sbjct 848 TCACGATGTCGAGGAGTTCGTCGGTGTGGTACGCCGCTACGGTGCGAGCCCTGACGTTCA 789 Query 23096 GGAAATGGTTGATGCGGCAAACAATAGGCCGGAAGTGGCTCACGTCGATGTGGCGAGGGC 23155 | |||| ||||| |||||||| | || |||| | | | | ||||||| Sbjct 788 AGCGTTGGTGGATGCAGCAAACAAACCCGCCGAGGTGGGGAAACTGAACATATCGAGGGC 729 Query 23156 ATGCGGAACGTGCTTATTAAAATTGGCGTGAAATTTTTGACTGATTAT-GACGAGTGGTG 23214 |||||||| || | | || |||| || ||| | ||| | | | |||| || Sbjct 728 TTGCGGAACCTGTCTGCTCAAGCTGGCCTG--ATTCTGGACAGGCTCTGGACGGATGAGA 671 Query 23215 ATTTATGGCGGTACT--AAAAGGACACGTTAAGTCATTCATTGTTCAGTCATTAGCCTGC 23272 || |||||| | || |||| | |||| ||| | || ||||||||| | | || ||| Sbjct 670 ATCTATGGCAGCCCTTCAAAATG--ACGTGAAGGCCTTTATTGTTCAGGCCCTGGCGTGC 613 Query 23273 TTTGATACCCCATCTCAGGTGGTCGATGCCGTCAATAAAGAATTCGGCATTGCGATTACT 23332 || || || || || ||||| || || || ||| | ||||||| || ||| | | || Sbjct 612 TTCGACACGCCTTCACAGGTCGTTGAAGCTGTCCAGAAAGAATATGGGGTTGTGGTAACC 553 Query 23333 CGGCAGCAGGTTGAATCTCATGACCCGACAAAGGCA 23368 || |||||||| ||| | ||||| || || ||| || Sbjct 552 CGCCAGCAGGTGGAAACACATGATCCTACGAAGACA 517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154874693976896