Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019539.1 Length=42391 Score E Sequences producing significant alignments: (Bits) Value seq698 746 0.0 >seq698 Length=3433 Score = 746 bits (826), Expect = 0.0 Identities = 797/1044 (76%), Gaps = 8/1044 (1%) Strand=Plus/Minus Query 7290 ATGGCAATTACTACTATTGGCAACATCGTAACTGGCAATATCCCTGTGCTGGCGTCTTAC 7349 ||| | || || || || || || ||| | || || || ||||| |||||| | || ||| Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 7350 ATGACCGAAGACCCGGTAGAGAAAACCGCGTTTTTCGACTCCGGTATCCTTACTCCAACC 7409 ||||| |||||||||| || || |||||||| ||||| ||||| || || || |||||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 7410 CCGTACGCGGCCGAGATTGCTAATGGTCCATCCAACATCGCTAACTTGCCGTTCTGGAAA 7469 |||||||| || ||||| || || || || |||||||| ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 7470 GCCATCGATACCTCTATCGAACCTAACTATTCGAACGATGTGTATCAGGATGTTGCTACC 7529 | ||||| | || |||| || ||||| |||||||||||||| || || || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 7530 CCGCGCGCTATTCAGACCGGTGAAATGATGGCCCGCGTTGCCTACCTGAACGAAGGTTTC 7589 |||||| ||| | ||||| || ||| ||||||| ||||| ||||| ||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 7590 GGCCAGGCCGACCTGACTGTCGAACTGACTAGCCAGAATCCGTTGCAGTCCGTAGCGTCT 7649 ||||||||||||||||||||||| ||||| ||| |||| ||| |||| ||||| || || Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 7650 CGTCTGGATAACTTCTGGCAGCGCCAGGCCCAGCGTCGTCTGATTGCTACCGCCCTCGGT 7709 || ||||| |||||||||||||||||||| ||||| || ||| | || ||| | || ||| Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 7710 CTGTACAACGACAACGTATCCGCTACTGATGCATATCACGAGCAGAACGACATGGTGGTC 7769 | |||||||||||| | ||| |||||||| | || ||||||||||||||| || Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 7770 GACGTTTCTGCAACTTCAGGCTTCGACGCAGGCGCATTCATCGACGCTACTCAGACTATG 7829 |||||||| || || || ||||| || ||||| ||||||||||| || ||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 7830 GGTGATGCGTTGATGGGTAACGGTGGTGAGGTTCTCGGTGCTATCGCGATGCACAGCTTC 7889 ||||||||||||||||| | || || |||| ||||| | || ||| |||| |||||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631 Query 7890 GTATATGCGCAGGCA--CGTAAAGCTCAGCTTATCGACTTCATCCGTGACGCTGAGAACA 7947 || |||| || | || ||||| ||| | ||||||||||||||||||||||| |||| Sbjct 630 GTGTATG-GC-GACATGCGTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACA 573 Query 7948 ACACCATGTTCGCCACCTACCAGGGCTACCGTGTTATCGTCGATGACAGCATGACCGTAG 8007 ||||| | |||| ||||||||||||||||| | | |||||||| |||||||| Sbjct 572 ACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGA 513 Query 8008 TAGGC-CAGGGTGCGCAGCGCAAGTTCATCTCCGTCATCTTCGGCCAGGGCGCTATCGGC 8066 | ||| | || || | ||||||||||||| ||| ||||| || ||||| |||||||| Sbjct 512 TCGGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGT 454 Query 8067 TATGGCGAAGGCAATCCCGAGATGCCGTTGGAATACGAGCGTGAAGCATCTCGCGCTAAC 8126 || || |||||| || ||| || | |||||||| ||| |||||| |||| Sbjct 453 TACGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAAC 394 Query 8127 GGCGGCGGCGTTGAAACCCTGTGGACTCGTAAGACCTGGTTGCTGCATCCGTTCGGCTAC 8186 || |||||||||||| ||||||| || ||||||||| ||||||| ||| |||||||| Sbjct 393 GGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTAC 334 Query 8187 AGCTTCACGAGCGCCGTAATCACCGGCAACGGCACCGAGACTATCGCC-CGCTCCGCTAG 8245 || ||| | ||| ||||||||||||||||||||||| | |||| ||||| || Sbjct 333 AGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCA-CGCCGCGCTCTGCCTC 275 Query 8246 CTGGCAAGACCTGGCTAACGCCGCTAACTGGAACCGTGTAGTCGACCGTAAGCATGTTCC 8305 |||||| || ||||| ||| | ||||||||||| || | || || ||||| | || Sbjct 274 CTGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCC 215 Query 8306 AATTGCATTCCTGGTAACTGGCGT 8329 || || |||||||| ||||| || Sbjct 214 GATCGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135480170067818