Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019541.1
Length=45364
Score E
Sequences producing significant alignments: (Bits) Value
seq5775 237 5e-58
>seq5775
Length=7611
Score = 237 bits (262), Expect = 5e-58
Identities = 518/768 (67%), Gaps = 16/768 (2%)
Strand=Plus/Plus
Query 31083 AGCAAGAGTTAGGATTACTAAAACTTGCTCAGGAACAGCGGTTGTTTCAGGCTGAGCAAT 31142
|||||||| | | || | || || |||||||| || || | ||| | ||||| || |
Sbjct 24 AGCAAGAGCTTGCATGGATGAAGCTGGCTCAGGAGCAACGTATCTTTGAAGCTGAACAGT 83
Query 31143 TCATGCTGGGAGAAATGGAGCGTATCAAAAAACGTTATGCGCTTGAGTATGATGAAATAT 31202
||||| |||| ||||||||||| | || ||||| ||||| ||||| ||| ||||||
Sbjct 84 TCATGATGGGTGAAATGGAGCGCCTTAAGAAACGCTATGCCTTTGAGCATGCTGAAATCG 143
Query 31203 CAAAAATCACTGATCTTGAAGAGCGTAGAAGGAAGATGAGTGCATTTCAGGCTGATTTTA 31262
| ||||| || ||| | ||||| ||||| | ||| | | ||| || | ||| ||||||
Sbjct 144 CTAAAATTACAGATGTGGAAGAACGTAGGCGCAAGTTCAATGCTTTGAATGCTAATTTTA 203
Query 31263 TTCGTAATGGTGTGGGGAATCCAACAATTGATCAGTATGATACCTCTAGTCAGTTTCTTA 31322
|| || |||||| || | ||| | ||||| | || |||||| | || || | |
Sbjct 204 TTAGTGGTGGTGTAGGTATGCCATCCTCTGATCCTAACGACACCTCTGGCCAACTTTTAA 263
Query 31323 AATCGACAAACTA--CACCAAGCCCAAGCAAACCAATATGCAAGTATTGGATGAAGATTA 31380
|||| | ||||| || || |||| |||| ||||| ||| |||| ||||| ||| |
Sbjct 264 AATCAATGAACTATGCAGCAGTGCCAA--AAACTAATATACAAATATTAGATGAGGATAA 321
Query 31381 CGCTCAAACTTATCAAAAGTTGAAAGATAATCTTGCAGCTGTTTTGGAGTCTGAAAAAGC 31440
|| ||| | || ||| | | |||||||| || |||||| | |||| |
Sbjct 322 TGCCAGAACATTGCAGAAGCTCAGGGATAATCTGGCTGCTGTTAAGTTAGCTGAGGGAAT 381
Query 31441 TAGTTATCAGGAACGATTGGAGGCGGAGCGCGTATTCAAAGAAGCAAGACAGCAAATGGA 31500
||| || |||| |||| ||||| || | || || | | || |||||| | |
Sbjct 382 CAGTCATGAGGAGAGATTAGAGGCTGAAAGAGTTTTTCTTGCAAAAAAACAGCAGTTACA 441
Query 31501 TAATGAGTACCACCTGAAGGCGATTGATGCAAGAAAAGCAGATCACGACAGTCAATTGCA 31560
||||||| | | ||||| | ||||| | ||||| ||||| || | ||| ||||
Sbjct 442 AGATGAGTATGATTTTAAGGCTTTCGATGCTCGTAAAGCGGATCAAGAAAATCAGATGCA 501
Query 31561 ATTATACAGTCAGATGATTTCATCTGCTTCAAGCACATGGGGAGGTTTAACTCAA----A 31616
|| || ||| ||||||||||||||||||| ||||||||| | || || ||| |
Sbjct 502 GTTCTATGAACAGTTGATTTCATCTGCTTCAAGTACATGGGGAAGCTTGAC-CAATATGA 560
Query 31617 TTGTTAAGGATGCGCGTGGTGAAAATTCACGCTCTTTCAAGGCAATGTTTATAGCTCAAC 31676
||| | || | | | |||||| || | | || ||||||||| |||||||
Sbjct 561 TTGGTCAGTACAAG---GATGAAAACTCTAAAACCTATAAAGCAATGTTTGCGGCTCAAC 617
Query 31677 AATCCTTTGCTATTGCTTCTGCGATTATCTCTGCTCATTTGGCAGCTACACAAGTAGCTG 31736
|| | ||||| ||||| ||||| ||| | | | | |||||||| | ||| |
Sbjct 618 AAGCTTTTGCAATTGCATCTGCTATTGTTAATACGGAATTGGCAGCCTCCAAAGCAATGA 677
Query 31737 CTGATGCAACGATCCCATTTT-TTGGGGCAA-AAATTGCGGCTTCAACCGCCATGCTTGC 31794
||| | || ||| |||| || || ||| | ||| || ||| || || | |||
Sbjct 678 CTGCTCCA--GATGTGGTTTTGTTTGGACAACAGATTAGTGCACAAACTGCTATCCGTGC 735
Query 31795 TATGGGATATGCAAATGCTGGTTTGATTGCTGGGCAAACAATAGCTGG 31842
||||| ||||| | |||||||||||| ||||| | || |||||
Sbjct 736 CATGGGTTATGCTTCAGTTGGTTTGATTGCAGGGCAGGCTATTGCTGG 783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144990300297356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |