Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq17400 123 8e-24 >seq17400 Length=8471 Score = 123 bits (136), Expect = 8e-24 Identities = 185/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 45425 AGGGAGAAAACTATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTG 45484 || |||| ||| ||| |||||||||||| | | ||| | ||| | ||| | || | Sbjct 4773 AGTGAGAGAACCATGCGCCAATATCTAGACCTTTTACAACATATCCTTGAACATGGTGGT 4714 Query 45485 GAGAAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTT 45544 || |||| ||||| || |||||||| || || || || || | |||| |||||||| Sbjct 4713 GATAAAGGTGATCGTACCGGAACAGGTACTCGTTCTGTATTTGGTCATCAGATGCGCTTT 4654 Query 45545 AACTTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATT 45604 || | | || || || || | || || |||||| | ||| | ||||| ||| | Sbjct 4653 GACCTCTCTAAAGGCTTTCCACTTTTAACCACAAAAAAGGTCCATTTTCGCTCTATCGTC 4594 Query 45605 TATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGT 45664 ||||||| | |||||||||||||||||||| ||||| ||||| ||||| || Sbjct 4593 GTTGAACTGTTATGGTTTTTAAAAGGCGATACCAATGTGAAATATTTACAGGATAACAAA 4534 Query 45665 GTGACGATTTGGGACGAGTGGGC 45687 || || || ||||| || ||||| Sbjct 4533 GTAACAATCTGGGATGAATGGGC 4511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157692865767082