Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019705.1
Length=38759
Score E
Sequences producing significant alignments: (Bits) Value
seq19217 131 4e-26
>seq19217
Length=4307
Score = 131 bits (144), Expect = 4e-26
Identities = 335/503 (67%), Gaps = 8/503 (2%)
Strand=Plus/Minus
Query 11826 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11885
|| ||| |||| || | ||||| || ||| || ||||||| | || || || ||
Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830
Query 11886 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 11941
| |||||||||||| || ||||| ||||| | || ||||| | |||| ||| |
Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770
Query 11942 TGCGTCAGAAAACCATCGATGCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGT 12001
|||| || | | ||||| |||||| || ||| || || || || |||||| |||||
Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710
Query 12002 GCTGCGGCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTT 12061
|||||||| || || | | || | || || ||||| ||| | ||| |
Sbjct 3709 GCTGCGGCCTGTTGCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACATCG 3650
Query 12062 CTGAAGAGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGA-C 12120
| ||| ||| ||| | || | ||| |||||| ||||| || ||||| ||||| |
Sbjct 3649 CCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAGACC 3590
Query 12121 TGGGGGACGGTGGTAGCCATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGC-GA 12179
|||| || ||| | | ||| |||||| ||||| ||||| || | ||||||| |
Sbjct 3589 TGGGTGA-AGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCACC 3532
Query 12180 GCTTGATAAGGCGCAATGTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGA 12239
|| || ||| || || || ||| |||||||||||| ||| | |||||| ||
Sbjct 3531 GCACGACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGCCCGA 3472
Query 12240 GGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299
|| || | | || ||| |||| || | |||| ||||| |||| ||||||||
Sbjct 3471 AGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGTTTGT 3412
Query 12300 GCTTGGACACTTCGACTGCTGGG 12322
| |||| | ||||| ||||
Sbjct 3411 TCATGGAGTTTGGGACTGTTGGG 3389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123862008953226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |