Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq19217 131 4e-26 >seq19217 Length=4307 Score = 131 bits (144), Expect = 4e-26 Identities = 335/503 (67%), Gaps = 8/503 (2%) Strand=Plus/Minus Query 11826 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11885 || ||| |||| || | ||||| || ||| || ||||||| | || || || || Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830 Query 11886 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 11941 | |||||||||||| || ||||| ||||| | || ||||| | |||| ||| | Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770 Query 11942 TGCGTCAGAAAACCATCGATGCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGT 12001 |||| || | | ||||| |||||| || ||| || || || || |||||| ||||| Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710 Query 12002 GCTGCGGCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTT 12061 |||||||| || || | | || | || || ||||| ||| | ||| | Sbjct 3709 GCTGCGGCCTGTTGCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACATCG 3650 Query 12062 CTGAAGAGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGA-C 12120 | ||| ||| ||| | || | ||| |||||| ||||| || ||||| ||||| | Sbjct 3649 CCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAGACC 3590 Query 12121 TGGGGGACGGTGGTAGCCATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGC-GA 12179 |||| || ||| | | ||| |||||| ||||| ||||| || | ||||||| | Sbjct 3589 TGGGTGA-AGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCACC 3532 Query 12180 GCTTGATAAGGCGCAATGTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGA 12239 || || ||| || || || ||| |||||||||||| ||| | |||||| || Sbjct 3531 GCACGACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGCCCGA 3472 Query 12240 GGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299 || || | | || ||| |||| || | |||| ||||| |||| |||||||| Sbjct 3471 AGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGTTTGT 3412 Query 12300 GCTTGGACACTTCGACTGCTGGG 12322 | |||| | ||||| |||| Sbjct 3411 TCATGGAGTTTGGGACTGTTGGG 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123862008953226