Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq17517 421 2e-113
seq3336 246 7e-61
seq14071 140 8e-29
seq19217 109 1e-19
>seq17517
Length=1011
Score = 421 bits (466), Expect = 2e-113
Identities = 635/898 (71%), Gaps = 6/898 (1%)
Strand=Plus/Minus
Query 4444 AGGCGACCGGAAAATTCAACGCGAAAGCAGAAGACGCACTCAAAGAGGCGCAGAAGTCAG 4503
|||| |||| |||||| | | || ||| |||| || || ||| |||| | |
Sbjct 913 AGGCCACCGACGAATTCAGCAAACAGGCTGAAAACGCGCTGTCGGAAGCGAAGAAAGCTG 854
Query 4504 GCAGGCTGTCAGAAGAAACAAAAGCTGCCGTTGATAAAATGGCTTCTGA-GTTCAATGCG 4562
|| ||| || ||||| || || || || ||| | ||||| |||| ||||||
Sbjct 853 GCTCGCTTTCTACCGAAACCAAGGCCGCTGTCGATGAGATGGCC-CTGAAGTTCAACAGC 795
Query 4563 CTGCGTGAAGCTGAAAAAACCCTGAAGGCCGCAATGGGCGAACTGGAGCAACATGTTGCC 4622
||| |||||||| || ||||||||| | || |||||||| || | | |||
Sbjct 794 CTGACCGAAGCTGAGAAGCAACTGAAGGCCCAGCTCGGAGAACTGGAACAGGAGTTCGCC 735
Query 4623 CAGATGCCACTGGCCAA--CGCTGCAAATGTGATCGAGACCGTTGGCCAGACAGTCATCA 4680
| || || | ||| ||| || | | | ||| ||| | ||| || |||||||
Sbjct 734 CGAATTCC--TACCCAGGCCGCCGCCACTCAGCGCGAAACCCTCGGCGGCACCGTCATCA 677
Query 4681 GCAGCGAAGCACTGAAAGCATTCGCGGCAAGCGTGGAAGGCGGTAAGCGCGTCAGCGTAC 4740
|||||||| ||| | |||||| ||| | ||||| ||||| ||||| |
Sbjct 676 AAAGCGAAGCTCTGGCCGAATTCGCAAAGAGCATTCAAGGCAACCGCCGCGTAAGCGTGC 617
Query 4741 CGGTGAACGCCGCGCTTATTTCCACGGATGTCGTCACCGGCGTGGTTGAACCGCAGCGTC 4800
| || |||||||| | | ||| | || | | ||||| || || || ||||| |
Sbjct 616 CAGTTCACGCCGCGTTGCTCAGCACCGGCGTTGCCGAAGGCGTAGTGGAGCCACAGCGCC 557
Query 4801 TGCCGGGTATCGACACCGCACCGAAACAGCGCCTTTTCATCCGCGATCTGATCGCGCCTG 4860
|||| |||||||| ||||| ||||| || |||||||| |||||||| ||||| |
Sbjct 556 TGCCAGGTATCGATGTGATGCCGAAGCAGCGACTGTTCATCCGTGATCTGATAGCGCCGG 497
Query 4861 GCCGCACCTCAGCACCGGCCATCTTCTGGGTGCAGCAAACCGGCTTCACCAATGCGGCGA 4920
|||||||| | | ||||| |||||||||||||| || |||||||||||||| || ||
Sbjct 496 GCCGCACCACTTCCCCGGCAATCTTCTGGGTGCAACAGACCGGCTTCACCAACGCCGCAC 437
Query 4921 AAGTTGTGCCGGAAGGCACCGCCAAGCCGTACAGCGATATCCAGTTCGCCACGCAGATCA 4980
||||| | ||| |||| || ||||||||||| ||||||||| ||| ||||||
Sbjct 436 GCGTTGTCGCTGAAAACACCCAGAAACCGTACAGCGACATCCAGTTCAACACCAAGATCA 377
Query 4981 CGCCGGTCACCACCATCGCGCACATGTTCAAGGCGTCCAAACAGATTCTGGATGACTTCG 5040
||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||| |||||||
Sbjct 376 CGCCGGTTACCACCATCGCGCATATGTTCAAGGCCTCCAAGCAGATCCTGGACGACTTCG 317
Query 5041 CGCAGCTGCAGTCCACTATCGACGCCGAGATGCGTTACGGACTGAAGTATGTGGAAGAAC 5100
| || ||||| || || |||||||| || ||||| ||||| ||||| || | |||||
Sbjct 316 CCCAACTGCAATCGACCATCGACGCAGAAATGCGCTACGGCCTGAAATACGCCGAAGAGT 257
Query 5101 AGGAAATTCTCTTTGGCGACGGTACCGGTGCGCACCTGAAAGGCATCGTTCCGCAGGCCT 5160
||| || | || || ||||| || || | |||||| | |||||||| ||||| ||
Sbjct 256 CGGAGATCTTGTTCGGTGACGGCACTGGCGTGCACCTCCACGGCATCGTGCCGCAAGCAG 197
Query 5161 CGGCATACGAGGCTGCGTTCGCCGTAGAACAACAGAACGGCATCGACGATCTGCGCCTCG 5220
|| || ||| ||||||| || || | |||||| | |||||||| |
Sbjct 196 AAGCTTATTCGGCAGCGTTCGAGCCTGACGCTATGACCCAGATCGACCAGCTGCGCCTGG 137
Query 5221 CAATGCTGCAGGCTCAGCTGGCACGCTTCCCGGCTTCCGGCCACGTCCTGCACTTCATCG 5280
| ||||| ||| | || ||||| ||||| ||||| ||| ||||| || ||||||| |
Sbjct 136 CGATGCTCCAGTCGCAACTGGCGCGCTTGCCGGCCAGCGGTCACGTGCTCCACTTCACTG 77
Query 5281 ACTGGGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCCTGGCGAACCC 5338
| ||||||||||| || |||||||| ||||| ||||| || || ||| | | |||||
Sbjct 76 ATTGGGCGAAGATCGAGCTCACCAAGGACACCCTGGGTCGATACATCATCGGCAACCC 19
>seq3336
Length=1417
Score = 246 bits (272), Expect = 7e-61
Identities = 338/469 (72%), Gaps = 10/469 (2%)
Strand=Plus/Minus
Query 2922 CCTTTACCGGTTCTAAAAACGCCGGAAAAATTATGGTTCTTGAGGGCGGGCTGAAATATC 2981
|||| | || || || |||||||| || || ||||| |||| ||| |||| || |
Sbjct 1313 CCTTCATGGGCTCCAAGAACGCCGGCAAGATCATGGTGGCCGAGGCTGGGTTGAAGTACC 1254
Query 2982 AGAACGTCACTATGAACCCGGAAGCAGCGCAGATGCTTGAGTCGCGGTCGTTCAGCATCG 3041
| |||| ||||| || ||||| |||| |||||||||||| ||||||||||||| |
Sbjct 1253 AAGGGATCACGATGAATCCCGAAGCCTCGCAAATGCTTGAGTCGAGGTCGTTCAGCATTG 1194
Query 3042 AGGAAATCTGCAGATGGTTCCGCGTACCGCCATTTATGGTCGGCCACACATCGAAACAGA 3101
| || || ||| | |||||||| || ||||| || |||||||| |||| || |||
Sbjct 1193 AAGAGATGTGCCGGTGGTTCCGGGTGCCGCCCTTCATGGTCGGTCACATGGATAAGCAGT 1134
Query 3102 GCAGCTGGGCATCGAGTC--TTGAGGGTATGAACCTCCAGTTCCTGACGCACACCCTGCG 3159
||| ||||| | || | || | |||||| || |||||||| ||| ||||
Sbjct 1133 CCAGTTGGGC--CAGTTCGGTGGAAGCGCAGAACCTGCACTTCCTGACCAACAGTTTGCG 1076
Query 3160 CCCCCTGCTGGTGAACATAGAGCAGGAAATAGGACGGTGCCTGCT-GGACAG-----CGA 3213
||| |||||||||||||| |||||||| || || |||||| | || || ||
Sbjct 1075 CCCGCTGCTGGTGAACATTGAGCAGGAGATCACCCGATGCCTGATCGGTGAGGCTGACGC 1016
Query 3214 TGATGAGGTTTTCGCGGAGTTCTCTGTAGAAGGACTGCTGCGCGCCGACAGCGCGGGCCG 3273
||| ||| | ||||| |||||| |||| ||||| |||||||||||||||||||| || ||
Sbjct 1015 TGACGAGTTCTTCGCTGAGTTCGCTGTTGAAGGCCTGCTGCGCGCCGACAGCGCCGGTCG 956
Query 3274 TGCTGCGTACTATACCAGTGCGCTCCAGAATGGGTGGATGTCCCGCAATGACGTGCGCCG 3333
|| || | || | || ||| || || || || ||||||| |||||| || ||||| ||
Sbjct 955 TGGCGCCTGGTACAACACTGCTCTGCAAAACGGCTGGATGTGCCGCAACGAGGTGCGGCG 896
Query 3334 TCTTGAGAATATGCCACCGATTGAAGGGGGTGACATTTACACCGTTCAG 3382
||| || || ||| | || || || || || | | ||| ||||||
Sbjct 895 TCTGGAAAACATGGCTCCAATCCCTGGCGGCGATACGTTCACTGTTCAG 847
Score = 156 bits (172), Expect = 1e-33
Identities = 188/256 (73%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 3692 GGGTGAAGGCGTAACAGCCAAACGTATCGCCGGTGCGCTTCGGGCGATGAATGGCGCCGA 3751
|||||| |||||||| || || || ||| || ||||||||| | || || | ||
Sbjct 443 GGGTGAGGGCGTAACTGCAAAGCGGATCAGCGCTGCGCTTCGATCTATCGGTGACAGTGA 384
Query 3752 CGTCACGGTCAATATTAACTCCCCTGGCGGGGACATGTTCGAAGGCCTGGCCATCTACAA 3811
|| || || || || ||| ||| ||||| ||| |||| ||||| ||||||||||||||
Sbjct 383 TGTGACCGTGAAGATCAACAGCCCAGGCGGCGACGTGTTTGAAGGGCTGGCCATCTACAA 324
Query 3812 CCTTCTGCGTGAATACGAAGGCCGTGTGACTGTGAAGGTGCTCGGTATTGCCGCCAGCGC 3871
||| ||||| || || | ||| ||||| ||| | | ||||| | |||||| ||
Sbjct 323 CCTGCTGCGCGAGCACAAGGGCAAAGTGACGGTGCAAATCCTCGGCCTCGCCGCCTCGGC 264
Query 3872 CGCCTCGGTCATTGCGATGGCCGGGGATGAAATTCAGATCGGCCGTGGTGCCTTCCTGAT 3931
||| ||| |||| || ||||| | |||||||| ||||||| || | | ||| |||||
Sbjct 263 CGCGTCGTTCATCGCTATGGCGGCTGATGAAATCCAGATCGCGCGCGCCGGCTTTCTGAT 204
Query 3932 GATCCACAACTGCTGG 3947
||| |||||| |||||
Sbjct 203 GATTCACAACAGCTGG 188
>seq14071
Length=4236
Score = 140 bits (154), Expect = 8e-29
Identities = 256/369 (69%), Gaps = 12/369 (3%)
Strand=Plus/Plus
Query 3671 TGTGATCGGGCAGGACTACTGGGGTGAAGGCGTAACAGCCAAACGTATCGCCGGTGCGCT 3730
||||||||| |||||| | || || ||||| || ||| ||||||| | |||||
Sbjct 3267 TGTGATCGGTGAGGACTGGTACGGGGAGGGCGTGACCCTCAAGCGTATCGATGCAGCGCT 3326
Query 3731 TCGGGCGATGAATGGCGCC---GACGTCACGGTCAATATTAACTCCCCTGGCGGGGACAT 3787
||||| || ||||| | || || | ||| | || ||||| || ||||| |||||
Sbjct 3327 GCGGGCCAT---TGGCGACCGTGAGGTGATGGTGTACATCAACTCGCCAGGCGGTGACAT 3383
Query 3788 GTTCGAAGGCCTGGCCATCTACAACCTTCTGCGTGAATACGAAGGCCG--TGTGACTGTG 3845
|||||||||| | ||||||||||||| |||| || || || | | || ||
Sbjct 3384 GTTCGAAGGCATTGCCATCTACAACCGCCTGCTCGAGCAC--AGCCAGAAGGTCACCACC 3441
Query 3846 AAGGTGCTCGGTATTGCCGCCAGCGCCGCCTCGGTCATTGCGATGGCCGGGGATGAAATT 3905
|||||||| ||||| || ||||||||||| ||| |||| |||| || | ||
Sbjct 3442 AAGGTGCTGGGTATGGCAGCCAGCGCCGCGTCGATCATCTACCTGGCTGGCGCCGAGCGC 3501
Query 3906 CAGATCGGCCGTGGTGCCTTCCTGATGATCCACAACTGCTGGGTCTACGCGATGGGTAAC 3965
||| ||| | | | ||||||||||||||||||||||||||| || | || |||
Sbjct 3502 CAGGTCGCCAGCAGCGCCTTCCTGATGATCCACAACTGCTGGACCTTCCTCGCCGGCAAC 3561
Query 3966 CGCCATGACTTTGCG-GAACTGGCACAGTCTCTTGAGCCGTTCGATACCGCTATGGCAGA 4024
||||| || ||||| || |||| | | ||| |||||| |||| ||| ||
Sbjct 3562 CGCCACTAC-TTGCGCGACGTGGCCGACGACATGGAGGAGTTCGACGCCGCCATGAGCGA 3620
Query 4025 CATCTACGC 4033
| |||||||
Sbjct 3621 CCTCTACGC 3629
>seq19217
Length=4307
Score = 109 bits (120), Expect = 1e-19
Identities = 333/507 (66%), Gaps = 16/507 (3%)
Strand=Plus/Minus
Query 12356 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 12415
|| ||| |||| || | ||||| || ||| || ||||||| | || || || ||
Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830
Query 12416 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 12471
| |||||||||||| || ||||| ||||| | || ||||| | |||| ||| |
Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770
Query 12472 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12531
|||| || | | ||||| || || || ||| || || || || || || ||||
Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710
Query 12532 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAG---AGAAATATTTTCCATGTAGTAACC 12588
| |||||| || | || || | | || || |||| || || || || | |||
Sbjct 3709 GCTGCGGCCTGTT---GCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACA 3653
Query 12589 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGG 12648
|||| | ||| ||| ||| | || | || || || |||||||| ||||| || |
Sbjct 3652 TCGCCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAG 3593
Query 12649 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCA-GCCG--A 12705
|| |||| ||||||| |||||||||| ||||| ||||| || | ||| |||| |
Sbjct 3592 ACCTGGGTGAAGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCA 3534
Query 12706 GCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 12765
|| || || || ||||| || ||| | |||||||| ||| | |||||
Sbjct 3533 CCGCAC--GACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGC 3476
Query 12766 CGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGT 12825
| || || || | | || ||| |||| || | |||| ||||| |||| ||||
Sbjct 3475 CCGAAGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGT 3416
Query 12826 TTGTGCTTGGACACTTCGACTGCTGGG 12852
|||| | |||| | ||||| ||||
Sbjct 3415 TTGTTCATGGAGTTTGGGACTGTTGGG 3389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120138567450642
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