Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019710.1
Length=40710
Score E
Sequences producing significant alignments: (Bits) Value
seq19217 109 1e-19
>seq19217
Length=4307
Score = 109 bits (120), Expect = 1e-19
Identities = 333/507 (66%), Gaps = 16/507 (3%)
Strand=Plus/Minus
Query 11919 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11978
|| ||| |||| || | ||||| || ||| || ||||||| | || || || ||
Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830
Query 11979 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 12034
| |||||||||||| || ||||| ||||| | || ||||| | |||| ||| |
Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770
Query 12035 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12094
|||| || | | ||||| || || || ||| || || || || || || ||||
Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710
Query 12095 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAG---AGAAATATTTTCCATGTAGTAACC 12151
| |||||| || | || || | | || || |||| || || || || | |||
Sbjct 3709 GCTGCGGCCTGTT---GCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACA 3653
Query 12152 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGG 12211
|||| | ||| ||| ||| | || | || || || |||||||| ||||| || |
Sbjct 3652 TCGCCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAG 3593
Query 12212 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCA-GCCG--A 12268
|| |||| ||||||| |||||||||| ||||| ||||| || | ||| |||| |
Sbjct 3592 ACCTGGGTGAAGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCA 3534
Query 12269 GCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 12328
|| || || || ||||| || ||| | |||||||| ||| | |||||
Sbjct 3533 CCGCAC--GACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGC 3476
Query 12329 CGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGT 12388
| || || || | | || ||| |||| || | |||| ||||| |||| ||||
Sbjct 3475 CCGAAGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGT 3416
Query 12389 TTGTGCTTGGACACTTCGACTGCTGGG 12415
|||| | |||| | ||||| ||||
Sbjct 3415 TTGTTCATGGAGTTTGGGACTGTTGGG 3389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130102931952832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |