Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq19217 109 1e-19 >seq19217 Length=4307 Score = 109 bits (120), Expect = 1e-19 Identities = 333/507 (66%), Gaps = 16/507 (3%) Strand=Plus/Minus Query 11919 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11978 || ||| |||| || | ||||| || ||| || ||||||| | || || || || Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830 Query 11979 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 12034 | |||||||||||| || ||||| ||||| | || ||||| | |||| ||| | Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770 Query 12035 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12094 |||| || | | ||||| || || || ||| || || || || || || |||| Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710 Query 12095 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAG---AGAAATATTTTCCATGTAGTAACC 12151 | |||||| || | || || | | || || |||| || || || || | ||| Sbjct 3709 GCTGCGGCCTGTT---GCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACA 3653 Query 12152 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGG 12211 |||| | ||| ||| ||| | || | || || || |||||||| ||||| || | Sbjct 3652 TCGCCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAG 3593 Query 12212 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCA-GCCG--A 12268 || |||| ||||||| |||||||||| ||||| ||||| || | ||| |||| | Sbjct 3592 ACCTGGGTGAAGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCA 3534 Query 12269 GCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 12328 || || || || ||||| || ||| | |||||||| ||| | ||||| Sbjct 3533 CCGCAC--GACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGC 3476 Query 12329 CGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGT 12388 | || || || | | || ||| |||| || | |||| ||||| |||| |||| Sbjct 3475 CCGAAGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGT 3416 Query 12389 TTGTGCTTGGACACTTCGACTGCTGGG 12415 |||| | |||| | ||||| |||| Sbjct 3415 TTGTTCATGGAGTTTGGGACTGTTGGG 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130102931952832