Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019719.1
Length=41528
Score E
Sequences producing significant alignments: (Bits) Value
seq19217 113 1e-20
seq14219 95.1 3e-15
>seq19217
Length=4307
Score = 113 bits (124), Expect = 1e-20
Identities = 334/507 (66%), Gaps = 16/507 (3%)
Strand=Plus/Minus
Query 12687 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12746
|| ||| | || || | ||||| ||| ||| || ||||||| | || || |||||
Sbjct 3889 GACCCGGCACTTGACCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGCTTTGGCGAG 3830
Query 12747 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12802
| ||||||||||| || ||||| ||||||| || ||||| | |||| ||| |
Sbjct 3829 AGCAACGAACTCTCTTTCGGTGGATTCCCTGCCGTTTCTCTGATTGCCCGGAGCTGACCA 3770
Query 12803 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12862
|||| || | | ||||| || || || ||| || || || || || || ||||
Sbjct 3769 TGCGCAAGCACATCATCGCGGCCATCCAGGTGCACGCGGCCGCCGAGTACCCGAAAGAGT 3710
Query 12863 GTTGTGGCGTGGTGGCGCAAAAGAGCCGGGTAG---AGAAATATTTTCCATGTAGTAACC 12919
| || ||| || | || || | | || || |||| || || || || | |||
Sbjct 3709 GCTGCGGCCTGTT---GCTAACCATCGGGCGAGCCCAGAAGTACTTCCCTTGCGGGAACA 3653
Query 12920 TCGCTACCGAGCCGACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGG 12979
|||| | ||| ||| ||| | || | || ||| || |||||||| ||||| || |
Sbjct 3652 TCGCCATGGAGGCGAACGAAGAGTTCCGACTTGATCCCGAGGACTATGCCGCTGCGGAAG 3593
Query 12980 ACTGGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCA-GCCG--A 13036
|| |||| ||||||| |||||||||| ||||| ||||| || | ||| |||| |
Sbjct 3592 ACCTGGGTGAAGTGATCGGCATCGTTCACTCGCACCCGGACGCTACCA-GCAGGCCGTCA 3534
Query 13037 GCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGC 13096
|| || || || ||||| || ||| | |||||||| ||| | |||||
Sbjct 3533 CCGCAC--GACCTGGCCATGTGCGAGGCCACGGCGCTGCCCTGGCACATTCTCTCCTGGC 3476
Query 13097 CGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGT 13156
| || || || | | || ||| |||| || | |||| ||||| |||| ||||
Sbjct 3475 CCGAAGGAGACCTCAGGACGATCACGCCGTCTGGCGCCGTGCCGCTGCTCAAGCGCCCGT 3416
Query 13157 TTGTGCTTGGACACTTCGACTGCTGGG 13183
|||| | |||| | ||||| ||||
Sbjct 3415 TTGTTCATGGAGTTTGGGACTGTTGGG 3389
>seq14219
Length=2704
Score = 95.1 bits (104), Expect = 3e-15
Identities = 152/217 (70%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 15412 TTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTGCCAGACGGCA 15471
||||| ||| |||| |||| | | || ||||| || || ||||||||||| ||||| |
Sbjct 1673 TTGATCGCTGGTCGCTCTATCGGATCGCGCAGTACTGCGACCAGATGGTGCCGGACGG-A 1615
Query 15472 AAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACG 15531
|||||| || | || ||||| | |||||||||| ||||| | ||| | | |
Sbjct 1614 AAGGGG-----GGCATGGAGCCACGCTTTACCTGCAACTTGTACTTCCAGAAGCAAGCTG 1560
Query 15532 ACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCG 15591
| || || |||| || | || | ||| | ||||||| ||| || ||||||||| ||
Sbjct 1559 AAGCTTATGCAGTGCTCCAGGACCTGGCCTCGATCTTCCACGGCCTGGCCTACTGGGACG 1500
Query 15592 GGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGA 15628
| ||||| |||| | || || |||||| ||||
Sbjct 1499 GAAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGA 1463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132719577269940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |