Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_019934.1
Length=39012
Score E
Sequences producing significant alignments: (Bits) Value
seq15216 113 1e-20
seq14219 104 6e-18
>seq15216
Length=457
Score = 113 bits (124), Expect = 1e-20
Identities = 197/284 (69%), Gaps = 12/284 (4%)
Strand=Plus/Plus
Query 3691 CGCTGGCGTAGGAGAATTTGCCGTCAATAACGTTGGCGCGGGTGTAGACA-----TACGT 3745
|||||| ||||| ||| |||||||| || ||||| |||||||||||| || | ||
Sbjct 21 CGCTGGAGTAGGTGAACTTGCCGTCGATGACGTTCGCGCGGGTGTAGGCAAAGTCGAAGT 80
Query 3746 CA-TATCGCGCGGCATATCCGCCAGCGCGGCCAGCTGATTACCGGCCCAGTATGTCATGC 3804
|| || ||||||||||||| |||| | | | ||| |||||| || |||||||
Sbjct 81 CAGTAGCGCGCGGCATATCAGCCAAGGTGAAGACCTGGCCCTGGGCCCAATAGGTCATGC 140
Query 3805 CGCGGAAGATGCTCGCCAGGTCGCGCAGCACCGTAAACGCCTCGTTCTGGCTCTGGATAT 3864
| || |||| || | ||| |||| || || | || || || |||||| | |
Sbjct 141 CTCGATAGATTGCCGAGATGTCACGCAACAGCGACCAGGCATCAGCCTTGCTCTGCAGGT 200
Query 3865 ACACGTCGCAGAGAAAACGTGGCTCAGTACCGCTGCCGCCGGTACCGTCCGGCACGGGCT 3924
|| || ||||| || || ||||| | | ||| || | |||||||| || | |
Sbjct 201 TCAGGTTGCAGATGAAGCGCGGCTC----CTG--GCCACCCTTCCCGTCCGGTACCAGTT 254
Query 3925 GATCGCAGTGCTGCGCGATGCGGTAGAGTTCCCACTTGTCCACC 3968
| ||||| | ||| | || ||||| || |||||||||||||||
Sbjct 255 GGTCGCAATACTGGGAAATCCGGTAAAGCTCCCACTTGTCCACC 298
>seq14219
Length=2704
Score = 104 bits (114), Expect = 6e-18
Identities = 225/335 (67%), Gaps = 10/335 (3%)
Strand=Plus/Plus
Query 3750 TCGCGCGGCATATCCGCCAGCGCGGCCAGCTGATTACCGGCCCAGTATGTCATGCCGCGG 3809
|||| ||||||||| || | | | ||| | ||| ||||||| | || |||| ||
Sbjct 1463 TCGCCCGGCATATCGGCGTTGACCACGATCTGGCTTCCGTCCCAGTAGGCCAGGCCGTGG 1522
Query 3810 AAGATGCTCGCCAGGTCGCGCAGCACCGTAAACGCCTCGTTCTGGCTCTGGATATACACG 3869
||||| |||||||| | ||||| | | | || || || |||||| |||| |
Sbjct 1523 AAGATCGAGGCCAGGTCCTGGAGCACTGCATAAGCTTCAGCTTGCTTCTGGAAGTACAAG 1582
Query 3870 TCGCAGAGAAAACGTGGCTCAGTACCGCTGCCGCCGGTACCGTCCGGCACGGGCTGATCG 3929
| |||| ||| |||||||| | ||| || | ||||||||||| ||| |||
Sbjct 1583 TTGCAGGTAAAGCGTGGCTCCAT------GCCCCCCTTTCCGTCCGGCACCATCTGGTCG 1636
Query 3930 CAGTGCTGCGCGATGCGGTAGAGTTCCCACTTGTCCACCTGCGTCGCATCCAGCCGGTCT 3989
|||| ||||||||| || ||||| ||| || ||| || || || | |||||
Sbjct 1637 CAGTACTGCGCGATCCGATAGAGCGACCAGCGATCAACCATTGTTGCGTCGATGCGGTCG 1696
Query 3990 CCGATCCCGAA--ACGGTCACTTAGCACCAGGTCGTAAAACACCCATGCGGGATTATTGC 4047
|||| ||| | | || | ||||||| |||||| || | ||| || || || |||
Sbjct 1697 CCGAGGCCGTAGTATGGGTGC--AGCACCAAGTCGTAGAAGATCCAGGCCGGGTTGTTGG 1754
Query 4048 TCCAGGCCCATTTAAACGAGCCGTCCCAGGTGCCG 4082
| ||||| ||| || | ||| ||||| |||||
Sbjct 1755 TATAGGCCTCTTTGAATGTGCCATCCCAAATGCCG 1789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124671313678444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |