Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_020488.1
Length=38682
Score E
Sequences producing significant alignments: (Bits) Value
seq12372 140 8e-29
seq7504 129 1e-25
>seq12372
Length=38393
Score = 140 bits (154), Expect = 8e-29
Identities = 222/314 (71%), Gaps = 11/314 (4%)
Strand=Plus/Minus
Query 25782 CGACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGG--TTCTGCCACTTGCGCGT 25839
|||||| || ||||| ||||| | ||||| ||| | |||| ||||| ||| ||
Sbjct 38292 CGACAATGATTTCAGTGGTGTAACG--CTTGA---TGCCGTCCTTCTCCCACTCGCGGGT 38238
Query 25840 GCGCAACTTGCCTTCAATGTAAAGCTTTGAG--CCTTTGCGTGTGTACTCGCCGGCCACC 25897
||| ||||||||| ||||| || ||| | |||||||| |||||||||||| | |
Sbjct 38237 TTGCAGCTTGCCTTCGATGTA--GCATTGGGAACCTTTGCGCAGGTACTCGCCGGCGATC 38180
Query 25898 TCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCT 25957
|| |||| ||| ||| | ||| || ||||||||||| || || ||| ||||||
Sbjct 38179 TCGGCCACCTTGCCGAACAACGACACGCGGTGCCACTCGGTGCGCTCGACCTTCTGCCCG 38120
Query 25958 GTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCG 26017
|| |||||||| | ||||||| |||||||| | ||| | || | || ||| | |||
Sbjct 38119 GTTTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTAGTTACCGCGTTGCCG 38060
Query 26018 TTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTA 26077
|| |||| || | ||||| |||||||| || | | || || | ||| || || ||
Sbjct 38059 TTTGGCAGGTAACGGACTTCGGGGTCCTGTCCGCAAGTCCCAACCAGGATCACTTTATTT 38000
Query 26078 ATTCCGCGTGCCAT 26091
| || || |||||
Sbjct 37999 ACGCCACGGGCCAT 37986
>seq7504
Length=9783
Score = 129 bits (142), Expect = 1e-25
Identities = 187/264 (71%), Gaps = 0/264 (0%)
Strand=Plus/Minus
Query 25828 CCACTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTC 25887
||||| || || ||| ||||||||| ||||| || || |||||||| ||||||
Sbjct 3064 CCACTCACGGGTCTGCAGCTTGCCTTCGATGTAGCACTGCGAACCTTTGCGCAGGTACTC 3005
Query 25888 GCCGGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTAC 25947
|||||| | ||| || | ||| ||| | | | ||||||||||| || || || ||
Sbjct 3004 GCCGGCAATCTCAGCAACCTTGCCGAACAGCGACACACGGTGCCATTCGGTACGCTCGAC 2945
Query 25948 CGGCTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCAC 26007
| ||| || | ||||||||| | | ||||| ||||| || | ||| | || | |||
Sbjct 2944 CTTCTGGCCCGACTGCTTGTCGGTCCATTGCTCGCTGGTTGCCAGGCTCAGGTTGGTCAC 2885
Query 26008 GGCGGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGAT 26067
||| ||||||| |||| || | ||||| || |||||||| || | ||||| | ||
Sbjct 2884 GGCATTACCGTTGGGCAGGTAGCGGACTTCGGGATCCTGGCCACAGGTACCGACCAGAAT 2825
Query 26068 TACCTTGTTAATTCCGCGTGCCAT 26091
|| ||||||| || || |||||
Sbjct 2824 GACTTTGTTAACCCCACGGGCCAT 2801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123615698819464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |