Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_020844.1
Length=40695
Score E
Sequences producing significant alignments: (Bits) Value
seq14566 147 6e-31
>seq14566
Length=1101
Score = 147 bits (162), Expect = 6e-31
Identities = 382/567 (67%), Gaps = 23/567 (4%)
Strand=Plus/Plus
Query 2387 CAGTCTCTTTACTCGCCTCATGGTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAGA 2446
||| ||| || |||| || ||||| |||||||| || |||||| || || || |
Sbjct 434 CAGGCTCCTTGATCGCATCCTGGTCATAGTAATAGCGTGGTGACTTGCTCAAGAGAAACA 493
Query 2447 TGTACTCGTGCGCCTTTGTGCAGCGGTCGCGCACGCTCTCCGGCATTGGGTTTGGCTTGT 2506
|||||||||||| |||||||| ||||| | | || ||||| || || |||||||
Sbjct 494 GGTACTCGTGCGCTTTTGTGCACCGGTCCCTGGTGGATTCAGGCATCGGATTCGGCTTGT 553
Query 2507 GCCAGATAATATCCTGACGCAGGTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGCC 2566
|||| || || || || |||||||||||||| || |||| |||||||| || | |||||
Sbjct 554 GCCAAATGATGTCTTGGCGCAGGTACCAGCCATCATCTTGAAGGGCGAAGGCGAGGCGCC 613
Query 2567 AGGG--GATGCCGATAAGGTCTTT-TGCTTTCAATCCGTTAGGTGCAGATCGTGACCCGC 2623
|||| ||||| || | |||||| ||| || | || | || | || ||| | ||
Sbjct 614 AGGGAATATGCCCATCAAGTCTTTCTGC-TTGAGCCCTATCGGCGGTGACCGTCGCTTGC 672
Query 2624 TGTCGCTGTGGCCTTCTTTCACAACCCGGTTAGCCCCCACGCCTT--TT---TGGTCATT 2678
||| || || | | | | | | || ||| | | | || || | |
Sbjct 673 -CACGCAGT-ACCGCCCCACGCGTCGC-CTGAGAAACCATGTCGTGCTTACCTGCTGA-- 727
Query 2679 TCTTCCAGAATGGTTTCCGCCTTGGCT---GGCATAGCTGTCCCCAAGATTCAACCAAAC 2735
| |||| || ||| ||| | | |||||| |||| || | || | ||| |
Sbjct 728 GCCACCAGGTGCGTATCCACCTGCGATTGACGCATAGGTGTCGCCCATGTTTACCCATAG 787
Query 2736 TGTCCCGTCGTCACGCAGCACCCTGCGCACCTCGCGGAACACGCGCACCAG-CGCTTCCA 2794
|| ||||| | ||||||||||| ||||| ||||| || || || || ||| | |
Sbjct 788 CGTGCCGTCATTACGCAGCACCCGACGCACTTCGCGAAATACCTCAACGAGACGC-CCGA 846
Query 2795 CGAACTCATCCGGTGACGCTTCAAGGCCGAGCTGGCCGTATTGCCCGTAGTCGCGCAGGC 2854
| || ||| | |||| | ||||| |||| ||| |||| ||||||||| ||||| |
Sbjct 847 CAAATTCAGCAGGTGTTTCCTCAAGACCGATCTGTCCGTCCATCCCGTAGTCACGCAGCC 906
Query 2855 CGAAGTACGGCGGGGATGTGACGCAACAATTAACGGACTTATCATCCATACCGTC--CAT 2912
|| |||| |||||||| |||||||| || || |||| || | | | |||| |||
Sbjct 907 CGTAGTAGGGCGGGGACGTGACGCAGGTGTTCACCGACTGGTCCTTC--AGCGTCCGCAT 964
Query 2913 AGATTCAAGGCAGTCCCCTATTAGAAC 2939
|| |||| |||||| || || | |||
Sbjct 965 CGACTCAATGCAGTCGCCGATCAAAAC 991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130054949459242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |