Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_021317.1
Length=21248
Score E
Sequences producing significant alignments: (Bits) Value
seq698 673 0.0
>seq698
Length=3433
Score = 673 bits (746), Expect = 0.0
Identities = 778/1043 (75%), Gaps = 6/1043 (1%)
Strand=Plus/Plus
Query 18090 ACGCCAGTTACCAGGAACGCAATCGGCACATGCTTACGGTCAACTACACGGTTCCAGTTG 18149
|| ||||| |||||||| || ||||| | ||||| || || | || ||||||||||||
Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250
Query 18150 GTAGCGTTAGCCAGGTCTTGCCAGCTAGCGGAGCGGGCGGTAGTCTCGGTGCCGTTGCCG 18209
|| || ||||| || |||||| || ||||| | || ||||||||||||||||||
Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCGTGGTCTCGGTGCCGTTGCCG 310
Query 18210 GTGATTACAGCGCTGGTGAAGCTGTAACCAAACGGATGCAGCAACCACGTTTTACGAGTC 18269
||||| || ||| ||||| || | ||| ||||||| ||| || || || ||
Sbjct 311 GTGATGGTGGCCGACAGGAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCTC 370
Query 18270 CACAGGGTTTCAACACCACCACCATTAGCACGAGATGCTTCACGTTCGTATTCCAGCGGC 18329
||||| |||||| || ||||| ||| | |||| ||| || ||||| | ||
Sbjct 371 CACAGCACTTCAACGCCGCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGGA 430
Query 18330 ATCTCAGGATTGCCTTCGCCGTAACCGATAGCACCCTGGCCGAAGATGATGGAGATGAAT 18389
|||||| |||||| |||||||||||||||||||| || ||||| | | ||||||
Sbjct 431 TGCTCAGGGGAGCCTTCACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAAC 490
Query 18390 TTACGGCTAGTGTCCTGA-CCAACTACGGTCATGCTGTCATCGACGATGACGCGGTAACC 18448
|| || | || || | || | |||||||| |||||||| | | |||||| ||
Sbjct 491 TTGCG-CGAGCTGCCGGTGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGCC 549
Query 18449 CTGGTAGGTGGCGAACATGGTGTTGTTCTCAGCATCACGGATGAAGTCGATAAGCTGGGC 18508
||||||||| |||| | ||||||||| ||||| ||||||||||||||||| | |||
Sbjct 550 CTGGTAGGTCGCGATCTGGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCTT 609
Query 18509 TTTACGGGCCTGT--GCGTATACGAAGCTGTGCATTGCGATAGCACCGAGAACCTCACCG 18566
|||| || ||| | || |||||||| |||| || || | ||||| |||| |||
Sbjct 610 CTTAC--GCATGTCGCCATACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCCG 667
Query 18567 CCGTTGCCCATCAATGCATCGCCCATAGTCTGGGTAGCATCGATGAATGCACCTGCGTCG 18626
|| | |||||||| ||||| ||||| |||||||| || |||||||| || || || |||
Sbjct 668 CCAGTCCCCATCAACGCATCACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATCG 727
Query 18627 AAGCCTGAAGTTGCAGAAACGTCGACCACCATGTCGTTCTGCTCGTGATATGCATCAGTA 18686
|| || || || |||||||||| ||||||||||||||| || | ||||||||
Sbjct 728 AAACCGCCAGCAGCGGAAACGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGTT 787
Query 18687 GCGGATACGTTGTCGTTGTACAGACCGAGGGCGGTAGCAATCAGACGACGCTGCGCCTGA 18746
||| | |||||||||||| | ||| || | ||| || | ||| || ||||| |||||
Sbjct 788 GCGCCGATGTTGTCGTTGTAGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTGG 847
Query 18747 CGCTGCCAGAAGTTATCCAGACGGGATGCGACGGACTGCAACGGATTCTGGCTGGTAAGT 18806
|||||||||||||| ||||| || | || ||||| |||| ||| |||| |||||| ||
Sbjct 848 CGCTGCCAGAAGTTGTCCAGGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAGC 907
Query 18807 TCTACAGTCAGGTCTGCCTGGCCGAAACCTTCGTTCAGATATGCAACGCGGGCCATCATT 18866
|| ||||||||||| |||||||| ||||||||||| || || ||||| ||||||| |||
Sbjct 908 TCGACAGTCAGGTCGGCCTGGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCATA 967
Query 18867 TCACCGGTCTGAATAGCGCGCGGGGTCGCGATGTCCTGGTATACGTCATTCGAGTAGTTA 18926
|| ||||| | ||| |||||| || | ||| ||| || || |||||||||||
Sbjct 968 TCGCCGGTTTCAATGTTGCGCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTTC 1027
Query 18927 GGCTCGATAGAAGTATCGATAGCTTTCCAGAACGGCAGGTTAGCGATGTTAGACGGTCCG 18986
||||||| || | ||||| | |||||| |||| | ||| |||||||| ||||| |||
Sbjct 1028 GGCTCGACGGATGCGTCGATCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCCG 1087
Query 18987 CGGGCAATCTCGGCAGCATACGGAGTTGGGGTCAAAATTCCGGAGTTGAAAAACGCGGTT 19046
|| || ||||| ||||| ||||| |||||||| | ||| ||||| | ||| ||||||||
Sbjct 1088 CGTGCGATCTCAGCAGCGTACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGTC 1147
Query 19047 TTCTCTACCGGGTCTTCCGTCATATAGGACGCCAGTACAGGGATATTGCCAGTTACGATG 19106
|| || |||||||||| |||| || || | ||| || ||||| || || || | |||
Sbjct 1148 TTTTCAACCGGGTCTTGGGTCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGATA 1207
Query 19107 TTACCAATAGTGGTGATTGCCAT 19129
||||| || |||||||| | |||
Sbjct 1208 TTACCGATCGTGGTGATAGGCAT 1230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 67851096222609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |