Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq17400 93.3 6e-14 >seq17400 Length=8471 Score = 93.3 bits (102), Expect = 6e-14 Identities = 130/181 (72%), Gaps = 10/181 (6%) Strand=Plus/Minus Query 99585 AAGTTGTCTTGTCAGCTCTATCAGCGTAGTGCCGACGTGTTCTTGGGTGTGCCGTTTAAC 99644 || |||||||| ||||| || ||||| |||||||| || ||| ||||||| || || || Sbjct 4242 AAATTGTCTTGCCAGCTTTACCAGCGCAGTGCCGATGTATTCCTGGGTGTACCCTTCAAT 4183 Query 99645 ATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAGGCGAATATGGCG-----G 99699 || ||| ||||| || || | ||| ||| |||| || || | | || | | Sbjct 4182 ATTGCGAGTTATGCCCTGCTCACTCATATGATTGCTCA--AGTC---TGTGACCTTCAAG 4128 Query 99700 TGGGCGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGG 99759 | || ||||| ||||||||||| |||||| || |||||| | |||||| | || || | Sbjct 4127 TTGGTGATTTTGTCTGGACCGGGGGTGATACACACCTGTATGCCAACCATTTTGAGCAAG 4068 Query 99760 C 99760 | Sbjct 4067 C 4067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716361674174520