Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq26395 170 6e-38 >seq26395 Length=417 Score = 170 bits (188), Expect = 6e-38 Identities = 205/279 (73%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 4922 GGCAATCTTGCGACCAATTTCAGCGTCGAAATTCTCTGGACTGGCGCAGGCGCTTTCTCC 4981 ||| |||||||||||||| || |||||||| ||||| || |||||||| ||||| || || Sbjct 2 GGCGATCTTGCGACCAATCTCCGCGTCGAAGTTCTCAGGGCTGGCGCACGCGCTCTCACC 61 Query 4982 TGTCACGGTGAAGCCGTTTTTCAGCACCAAGACGCAAAAGGTAAGAAATTTCAACTCATC 5041 || ||||||||||| || |||||| | |||||| ||||| || || ||||||| | Sbjct 62 GGTGACGGTGAAGCCATTGCGCAGCACTAGGACGCAGAAGGTCAGTAACGCCAACTCACC 121 Query 5042 ATGAGCCCCACACATTCGAGTCAATTCATCCTGCTTGTGGAAAGCCTGTTGCACGCCATC 5101 ||| || ||| | ||| ||||| ||||||||| | ||| || ||||||||||| Sbjct 122 ATGCGCGCCAGTGAGTCGGGTCAACTCATCCTGCGAATTGAAGGCGGCCTGCACGCCATC 181 Query 5102 TGATGCAGTAAAGTAATACTCACCAACAATAATCGAATGAATATGCTCCAGAGTAACGCG 5161 | |||||||| | ||||| || || || | | | | || || ||||||| || Sbjct 182 GGCAGCAGTAAAAAAGTACTCGCCGACGATGTTGGCTTTCAGATCTGCCGGAGTAACACG 241 Query 5162 TGGAGCAGTCAATCCTTTATCTTTAATTTCATGCTCAAT 5200 || || ||||| || || | | |||||| ||||| || Sbjct 242 CGGCGCGGTCAAGCCCTTGGCCTGAATTTCCTGCTCGAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151989346695684