Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_021775.1 Length=42215 Score E Sequences producing significant alignments: (Bits) Value seq698 756 0.0 >seq698 Length=3433 Score = 756 bits (838), Expect = 0.0 Identities = 801/1047 (77%), Gaps = 14/1047 (1%) Strand=Plus/Minus Query 27374 ATGGCTATTACCACCATTGGCAACATCGTAACCGGTAACGAACCTGTCCTGCTGTCCTAT 27433 ||| |||| ||||| || || || ||| | ||||||||| || || ||| || || Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 27434 ATGACGCAGGACCCGGTAGAGAAAACCGCTTTCTTTGAGTCCGGCATTCTTACCCCTACT 27493 |||| || |||||||| || || ||||| ||||| |||||||||||||| ||||| || Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 27494 CCGTATGCTTCCGAAATTGCTCGCGGCCCGTCCAACATCGCCAATATTCCTTTCTGGAAA 27553 ||||| ||| | || || || ||||||||||| |||||||| || || || | |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 27554 GCGATTGATACCTCTATCGAACCGAACTACTCGAACGACGAGTATCAGGATATCGCAACA 27613 |||| || | || |||| ||||||||||||||||| | ||| || | ||| Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 27614 CCGCGTAACGTGCAGACCGGCGAGATGATGGCGCGCGTAGCGTACCTGAACGAAGGTTTT 27673 ||||| ||| | | |||||||| ||| |||| || || |||||||| |||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 27674 GGGCAGGCTGACCTGACCGTCGAACTGACCAGCCAGAATCCACTGCAATCAGTGGCTAAC 27733 || ||||| |||||||| ||||| ||||||||| |||| || |||||||| || ||| Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 27734 CGCCTGGATAACTTCTGGCAGCGCCAGGCACAGCGTCGTCTGATTGCTACCGCTCTCGGC 27793 |||||||| |||||||||||||||||||| ||||| || ||| | || ||| |||| || Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 27794 CTGTACAACGATAACGTTGCTGCGACCGACGAGTACCACACCCAGAACGATATGGTTATT 27853 | |||||||| ||| | | || || || | || ||| ||||||||||| ||||| || Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 27854 GATGTGTCCGCCACCCTGGGCTTCGATGCAGGCGCCTTTATCGACGCCACCCAGACTATG 27913 || || ||||| | || |||||||| |||||||| |||||||| |||||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 27914 GGCGACGCGCTGATGGGCTCAACTGGTG---AAGTGCTCGGTGCTATTGCGATGCACAGC 27970 || || ||| ||||||| ||||| | | |||||||| | || ||| |||| ||| Sbjct 690 GGTGATGCGTTGATGGG---GACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGC 634 Query 27971 TTCGTATACGGC--CAGGCGCGCAAAGCTAACCTCATTGACTTCATCCGTGACGCTGACA 28028 ||||| || ||| || ||| |||| | | || |||||||||||||||||||||| Sbjct 633 TTCGTGTATGGCGACATGCGTAAGAAGC--AGATGATCGACTTCATCCGTGACGCTGACA 576 Query 28029 ACAACACCATGTTCGCCACCTATCAGGGCTACCGTGTGGTTGTCGATGACAGCATGACCG 28088 |||||||| | |||| ||||| ||||||||||| |||| |||||||| ||||||| Sbjct 575 ACAACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCG 516 Query 28089 TTGTGGGCACCGGTACCGACCGTAAGTTTATCAGCATCATCTTCGGTAACGGCGCAATCG 28148 | | |||||||| | | || ||||| |||||| | ||||| ||| | || || |||| Sbjct 515 TGATCGGCACCGGCAGCTCGCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCG 456 Query 28149 GCTACGGCGAAGGTACTCCGGAGAACCCACTGGAATATGAGCGTGAAGCCTCACGCGGTA 28208 | ||||| ||||| | || ||| | ||| | || ||||| ||| | ||||||| Sbjct 455 GTTACGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTA 396 Query 28209 ACGGCGGCGGTGTTGAAACCCTGTGGACCCGTAAAACCTGGCTGCTGCACCCGCTGGGCT 28268 |||| ||||| |||||| ||||||| ||| || |||||||||||||||||||| |||| Sbjct 395 ACGGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCT 336 Query 28269 ACAGCTTCACTAGC-GCGGTAATCACCGGTAACGGCTCCGAAACCATCGCC-CGCTCCGC 28326 |||| ||| || | || |||||||| |||||| |||| |||| |||| ||||| || Sbjct 335 ACAGTTTC-CTGTCGGCCACCATCACCGGCAACGGCACCGAGACCA-CGCCGCGCTCTGC 278 Query 28327 TTCCTGGCAGGACCTGGCGAACGCCACCAACTGGAATCGCGTCGTAGAGCGTAAACACGT 28386 ||||||||||| |||||| |||||||||||||| ||||| | ||||| || ||| | Sbjct 277 CTCCTGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACAT 218 Query 28387 TCCTATCGCGTTCCTGGTTACTGGCGT 28413 || ||||| |||||||||||||| || Sbjct 217 CCCGATCGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134917175476362