Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq14401 104 1e-17 >seq14401 Length=13065 Score = 104 bits (114), Expect = 1e-17 Identities = 180/258 (70%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 7955 AATTGAAACCAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGATG 8014 |||| ||||| ||||| || | | ||| ||||||| |||| ||| || | || || Sbjct 12721 AATT-AAACCTGGTGAGACTATTCTGGTTAAAACTGGAATGGCGATTTATATTGAAGACC 12779 Query 8015 TGAAGTATGCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGC 8074 || | ||| | | ||| | || ||||| || ||||| ||||||||||| | || | Sbjct 12780 CAAATTTTGCGGGTCTAATTTTGCCACGTTCTGGACTGGGTCATAAGCATGGGATTGTAC 12839 Query 8075 TTGGGAACCTTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCT 8134 |||| || || || |||||||| |||||||||||||| || ||||||||| ||| Sbjct 12840 TTGGTAATCTGGTGGGCCTGATTGACTCAGACTATCAGGGCGAGCTTATGGTATCTGTCT 12899 Query 8135 GGAATCGCTCTACAGA-GCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTA 8193 |||| || | |||| |||||| | | |||||||| || | ||||| ||| Sbjct 12900 GGAACCG-TAGTCAGACAGTTTTTACACTGGAACCTGGTGAGCGCCTAGCTCAATATGTA 12958 Query 8194 ATCGTGCCTGTAATGCAG 8211 | || |||||| | ||| Sbjct 12959 CTGGTTCCTGTAGTCCAG 12976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230502487225387