Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq4839 123 2e-23
seq29157 122 8e-23
seq11056 111 1e-19
seq11297 96.9 3e-15
seq9861 95.1 1e-14
seq20241 93.3 4e-14
seq24420 87.8 2e-12
>seq4839
Length=4080137
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 529645 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 529704
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 529705 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 529764
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||||||||||||||||||||| ||| | | | | |||| || || ||
Sbjct 529765 GCAGAGGCTCATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 529824
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || || ||||| || || ||| |||| |||| ||| | |||||
Sbjct 529825 CATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTGAGGGGAGG 529872
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || | || ||||| || || || || || || || ||
Sbjct 528503 ACAATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACTCTGGAGGTGGAGCCC 528562
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || |||||||| || ||||| || || || || ||
Sbjct 528563 AGTGACACCATCGAGAACGTCAAGGGGAAGATCCAGGAAAAAGAGGGCATCCCCCCAGAC 528622
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | ||||||||||||||||||||||||| ||| | | | | |||| || ||
Sbjct 528623 CAGCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 528682
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || || || ||||| || ||| ||||
Sbjct 528683 AACATCCAGAAAGAGTCGACCCTGCACCTGGT 528714
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 528733 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 528792
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 528793 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 528852
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||| |||||||||||||||||||| ||| | | | || ||||| ||
Sbjct 528853 GCAGAGGCTGATTTTTGCCGGGAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 528912
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 528913 CATCCAGAAAGAGTCGACCCTGCACCTGGT 528942
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 528961 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 529020
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 529021 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 529080
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || ||||||||||| ||| | | | || ||||| ||
Sbjct 529081 GCAGAGGTTGATCTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 529140
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 529141 CATCCAGAAAGAGTCGACCCTGCACCTGGT 529170
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 529189 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 529248
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 529249 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 529308
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | ||||||||||||||||||||||| ||| | | | || ||||| ||
Sbjct 529309 GCAGAGGCTCATCTTTGCCGGGAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 529368
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 529369 CATCCAGAAAGAGTCGACCCTGCACCTGGT 529398
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 529417 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 529476
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 529477 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCA 529536
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || ||||||||||| ||| | | | || ||||| ||
Sbjct 529537 GCAGAGGTTGATCTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 529596
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 529597 CATCCAGAAAGAGTCGACCCTGCACCTGGT 529626
>seq29157
Length=6873498
Score = 122 bits (134), Expect = 8e-23
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || || || || || || || || || || ||| | || ||| | |
Sbjct 2566605 GATGCAGATTTTCATGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTC 2566546
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct 2566545 AGATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCA 2566486
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881
||| | |||||||||| || || || |||||||| | | | || |||| || || |
Sbjct 2566485 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGA-TGGCCATACTTTGTCTGACTACA 2566427
Query 24882 ACATTCAAAAGGAATCGAC 24900
||||||||||||| || ||
Sbjct 2566426 ACATTCAAAAGGAGTCCAC 2566408
>seq11056
Length=1110308
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || ||||| || || || |
Sbjct 356650 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCAAACCCTCG 356709
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| |||| |||||||| ||||| |||||||| ||||| || ||
Sbjct 356710 GATACAATAGAAAATGTAATGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAG 356769
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || | ||| ||| | | |||| || || |||
Sbjct 356770 CAAAGACTGATCTTTGCTGGCAAGCAACGGGAAGATGGACGTACTCTGTCTGACTACAAC 356829
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||||||||||| || || || || |||||| || | || || ||||
Sbjct 356830 ATTCAAAAGGAGTCCACTCTTCATCCTGTGTTGAGACTTCGTGGTGGCG 356878
>seq11297
Length=1864957
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/215 (70%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
||| ||| || || || || || || || || || || || ||||| || ||| || |
Sbjct 1109855 TGCGGATTTTCATGAAGACCCTGACAGG-AAGACCATCACTCTCGAGGTCGAACCCTTGG 1109797
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
| ||| |||||| ||||| |||||||| ||||| |||||||| | || || || |
Sbjct 1109796 ATACAATAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 1109737
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
|| | |||||||||| || || || ||||| ||| | | ||| || || |||
Sbjct 1109736 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACTACCACA 1109677
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||| || || || || | |||||| ||
Sbjct 1109676 TTCAAAAGGAGTCCACCCTTCATATCGTGTTGAGA 1109642
>seq9861
Length=3422124
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | || | | || || || || || || ||||| || ||| || |
Sbjct 2119575 GATGCAGATTTTTGTGAAGATCCGGACAGGGAAGACCATCACTCTCGAGGTCGAACCCTC 2119634
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || |||||| ||||| ||||||||||| || |||| ||| ||| | || ||
Sbjct 2119635 GGATACGATAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGTAATTCCTTCTGACCA 2119694
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||| ||| |||||| || || || | ||| ||| | | |||| || | ||
Sbjct 2119695 GCAACGACTGACCTTTGCTGGCAAGCAACGGGAAGATGGACGTATTTTGTCTGACCACAA 2119754
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||||| || || || || | ||||| ||
Sbjct 2119755 CATTCAAAAGGAGTCTACTCTTCATCTTTTGTTGAGA 2119791
>seq20241
Length=2711202
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 1753355 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1753296
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 1753295 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1753236
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || ||||||||||| ||| | | | || ||||| ||
Sbjct 1753235 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 1753176
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||| || || || ||||| || ||| |||| | || || | ||||||
Sbjct 1753175 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGAGGC 1753127
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 1753583 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1753524
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 1753523 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1753464
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || ||||||||||| ||| | | | || ||||| ||
Sbjct 1753463 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 1753404
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 1753403 CATCCAGAAAGAGTCGACCCTGCACCTGGT 1753374
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 1753811 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 1753752
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| || || ||||| || || || || ||
Sbjct 1753751 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1753692
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | | |||||||| || ||||||||||| ||| | | | || ||||| ||
Sbjct 1753691 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAA 1753632
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || ||||| || ||| ||||
Sbjct 1753631 CATCCAGAAAGAGTCGACCCTGCACCTGGT 1753602
>seq24420
Length=3268280
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/209 (70%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||| | || || || || || || ||||| |||
Sbjct 2497668 ATGCAGATCTTCGTGAAGACCCTGACCTGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 2497609
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||| || |||||||| || || ||||| ||
Sbjct 2497608 GACACTG-AGAA--TGTGAAGGCCAAGATCCAGGATAAAGAAGGCAT-CCCCCCGACCAG 2497553
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | ||||||| || |||||| |||| ||| | | | || ||||| |||
Sbjct 2497552 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCCGCACTCTTTCTGATTACAAC 2497493
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || ||||| |||||| ||||
Sbjct 2497492 ATCCAGAAAGAGTCGACCCTACACCTGGT 2497464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449724878687640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |