Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq8977 277 9e-70 seq1734 242 2e-59 >seq8977 Length=2429 Score = 277 bits (306), Expect = 9e-70 Identities = 564/837 (67%), Gaps = 3/837 (0%) Strand=Plus/Minus Query 67568 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 67627 ||| |||| ||||| | | ||||||| ||| |||||||| || || || | ||| Sbjct 2110 ATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCGGCCTGCCAAAAGGC 2051 Query 67628 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 67687 || | || || |||||||||||||| ||||| || || | || || ||| | | Sbjct 2050 CGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTG 1991 Query 67688 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 67747 | ||| | || ||||| || | || | || | | |||||||||| || | || Sbjct 1990 ATTGCCCAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTG 1931 Query 67748 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 67807 || ||||| ||||||| ||| || || | || || | || ||||| ||||| Sbjct 1930 GATCCTGAATACGCCGGCAAGCTGGGCGTCAACGTTGATGACCTGCTGGTTTCCCAGCCG 1871 Query 67808 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 67867 ||||| |||||||| |||||||| ||| ||| | || || || || | | Sbjct 1870 GACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCATCGAC 1811 Query 67868 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 67927 | ||||| || ||||| ||||| |||||||| || ||| || ||||||| || || Sbjct 1810 GTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCCAAGGCTGAAATCGAAGGCGAAATG 1751 Query 67928 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 67987 || ||| |||||| |||||||| |||||||||||||| ||||| |||| || | ||| Sbjct 1750 GGCGACATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATCACC 1691 Query 67988 GGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATC 68047 || | || | | ||||| || | | | || ||| | || ||||||| Sbjct 1690 GGTAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGTATGAAGATC 1631 Query 68048 GGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTAC 68107 ||| || | | ||||| || ||||||||||||||||| || ||| |||||| Sbjct 1630 GGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGCGCTGAAGTTCTAC 1574 Query 68108 GCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 68167 || ||||| ||| ||||| ||||| | | | | | | ||||||||| || |||| ||| Sbjct 1573 GCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAGGAAGGTGACGAGGTTGTT 1514 Query 68168 GGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCT 68227 || | | || ||||| ||||| || |||||||| | || || || ||| |||||| Sbjct 1513 GGTAGCGAAACCCGCGTCAAGGTCGTGAAGAACAAAGTTGCCCCGCCATTCCGTCAGGCT 1454 Query 68228 GAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCC 68287 ||||| || |||||||| |||| || | || | | ||| | ||||| ||| | Sbjct 1453 GAGTTCCAGATTCTCTACGGCAAGGGTATCTACCTGAACGGCGAGATGATCGACCTGGGC 1394 Query 68288 GTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATC 68347 || | || || || ||||||| || ||||||| ||| | || || ||| Sbjct 1393 GTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACGGCAGCAAGATC 1334 Query 68348 GGCCAGGGCAAGCCCAAGACCGTGCAGTGGCTGAAGGACAACCCGGACGTCGCCGCC 68404 || ||||||||| |||| | | ||| ||| ||| |||||||| |||| ||| Sbjct 1333 GGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGATATCGCTGCC 1277 >seq1734 Length=3873 Score = 242 bits (268), Expect = 2e-59 Identities = 533/796 (67%), Gaps = 7/796 (1%) Strand=Plus/Plus Query 67566 CCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGG 67625 ||||| |||||||||| | | |||||| ||| || || ||||| || || | | Sbjct 372 CCATTTCCACCGGCTCTCTGGGGCTGGACATCGCGCTGGGTATCGGCGGTCTGCCAAAAG 431 Query 67626 GCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACG 67685 |||| | || || |||||||| || || || ||||| || | ||| | ||| | Sbjct 432 GCCGTATCGTCGAAATCTACGGCCCGGAATCGTCAGGTAAAACCACGCTCACGCTCTCGG 491 Query 67686 CGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTC 67745 | ||| | |||||||| || | || | || | | |||| ||||| ||| ||| Sbjct 492 TCATCGCCGAAGCCCAGAAAAGTGGCGCCACCTGTGCGTTCGTCGATGCCGAGCATGCTC 551 Query 67746 TCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGC 67805 | || || |||||||| | || || || | || ||| | || ||||| ||||| Sbjct 552 TTGATCCGGAGTACGCTGGCAAACTGGGCGTCAACGTAGACGACCTGCTGGTTTCGCAGC 611 Query 67806 CAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTT 67865 | ||||| || |||||||| ||||| || ||| | | || ||| | ||| Sbjct 612 CTGACACGGGTGAGCAGGCGCTGGAAATTACCGACATGTTGGTACGGTCCAATGCGGTCG 671 Query 67866 CCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACA 67925 | ||||| | || ||||| |||||||| ||||| || ||| || ||||||| || | Sbjct 672 ACGTCATCATCGTCGACTCCGTGGCGGCGCTGGTACCCAAGGCTGAAATCGAAGGCGAAA 731 Query 67926 TCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGA 67985 | || ||| |||||| ||| |||| || || |||||||| ||||| |||||||| | | Sbjct 732 TGGGTGACATGCACGTGGGCTTGCAGGCTCGTCTGATGTCCCAGGCGCTGCGCAAGATCA 791 Query 67986 CCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGA 68045 |||| | || | | ||||| || | | | || ||| | || ||||| Sbjct 792 CCGGTAACATCAAGAACGCCAACTGCCTGGTTATCTTCATCAACCAGATCCGTATGAAGA 851 Query 68046 TCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTT 68103 ||||| | || | || ||||| || ||||||||||| || || || ||| || Sbjct 852 TCGGCGTGATGTTCGGTA--GCCCG---GAAACCACCACCGGCGGCAACGCACTGAAGTT 906 Query 68104 CTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGC 68163 ||| |||||||| || |||| ||||| | | || | | ||||||||||| |||| Sbjct 907 CTATGCCTCGGTTCGCCTGGACATCCGCCGCACCGGTGCAGTCAAGGAAGGCGACGAGGT 966 Query 68164 TGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCA 68223 || || | || ||||| ||| | |||||||||||| ||||||| ||| ||| || Sbjct 967 GGTGGGTAGTGAAACCCGCGTCAAGATCGTCAAGAACAAGGTGGCGCCACCGTTCCGTCA 1026 Query 68224 GGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACAT 68283 || || || || | |||||| |||| || | ||| | | ||| || |||| | Sbjct 1027 AGCGGAATTCCAGATTCTGTACGGCAAGGGTATCTACCGTAACGGTGAAATCATCGATCT 1086 Query 68284 GGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAA 68343 || ||| || | || || || |||| || || ||||||| || ||| | ||| || Sbjct 1087 GGGCGTGTCTCAGGGCCTGGTCGAGAAATCGGGCGCCTGGTACAGCTACCAAGGCAACAA 1146 Query 68344 CATCGGCCAGGGCAAG 68359 ||||| ||||||||| Sbjct 1147 GATCGGTCAGGGCAAG 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247356975980304