Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq18056 239 7e-58
seq2883 239 7e-58
seq2733 192 1e-43
seq17968 129 1e-24
seq15391 107 3e-18
seq18487 100 5e-16
seq10015 98.7 2e-15
seq21746 93.3 7e-14
seq15155 91.5 2e-13
>seq18056
Length=8613
Score = 239 bits (264), Expect = 7e-58
Identities = 332/457 (73%), Gaps = 11/457 (2%)
Strand=Plus/Minus
Query 35452 GGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGT 35511
|||| || || ||||||||| || || |||||||| ||| ||| || | ||| ||
Sbjct 8339 GGGTGACGCCACGCTGGCCCTGATACTTGCCGCCGCGGTCCCGGTAGGACACTTCACATG 8280
Query 35512 CCTCGTCACTCTCGAA-AAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCC 35570
|||||| || | |||||||||||||||| | |||||||| ||||| | |||
Sbjct 8279 GCTCGTCCGACTGCAGGAAACAGCATCTGCGCCCCCCCTTCGTTGGCGTAGATCTTGGCC 8220
Query 35571 GGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGC 35630
|||| |||| |||||| ||||||||| ||||| || |||||||| ||||| ||||||
Sbjct 8219 GGCAACGTGGTGGTGTTGGAGAACTCCAGCGTCACGTGGCCTTCCCATTCAGGCTCCAGC 8160
Query 35631 GGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACG 35690
|| ||||||||||||||||| || || ||||| ||||||||||| |||| || |
Sbjct 8159 GGGGTCACGTTGACGATGATGCCGCAACGCGCATAGGTGCTCTTGCCCAGGCAGATGGTC 8100
Query 35691 AGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGC 35750
|| |||| |||||| ||||||||||| || || ||||||||||| || ||| ||| |||
Sbjct 8099 AGCACGTCGCGCGGGATGCGGAAGTACTCCACGGTGCGTGCCAGTGCAAAGGAGTTGGGC 8040
Query 35751 GGAATCAGGATGC---TGTCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTT 35806
|| || ||||| ||| ||| | | | | | || || ||||||||||||
Sbjct 8039 GGGAT---GATGCACACGTCGCTCTTGA-TGTCGACGAAGCTGCCGGCATCGAAGTTCTT 7984
Query 35807 CGGATCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CGCA 35865
||| || || || |||||| ||||| ||||| | | || ||||| ||| ||||
Sbjct 7983 CGGGTCGACGGTGGCCGAGTTGATATTGGTAAAGACCTTGAATTCGTCGGC-GCAGCGCA 7925
Query 35866 CGTCATAACCATACGACGAGTTGCCGTACGAGATAAC 35902
|||| || || || ||| |||| | ||||| ||
Sbjct 7924 CGTCGTAGCCGTAGCTCGAAACGCCGAAAGAGATGAC 7888
>seq2883
Length=1484
Score = 239 bits (264), Expect = 7e-58
Identities = 323/446 (72%), Gaps = 8/446 (2%)
Strand=Plus/Plus
Query 35466 TGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCACTCTCG 35525
|||||||| || || || | || |||||||| || | ||| ||| |||| || ||
Sbjct 105 TGGCCCTGATACTTGCCCGCACGGTCCTTGTAGGACACTTCACAGGCCTCATCGGACTGC 164
Query 35526 AAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTG 35585
| ||||||||||| ||||| |||||||| ||||| | |||||||| | |||| |||
Sbjct 165 AGGAACAGCATCTGTGCCACGCCTTCGTTGGCGTAGATTTTCGCCGGCAAGGTGGTGGTG 224
Query 35586 TTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACG 35645
||| ||| ||||| || || || |||||||||||||| || |||||||| || ||||||
Sbjct 225 TTGGAGAATTCCAGGGTGACGTGGCCTTCCCACTCAGGCTCAAGCGGCGTGACATTGACG 284
Query 35646 ATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGA 35705
|| || || ||||| || |||||||| ||||||| || | || |||| ||| ||
Sbjct 285 ATAATGCCGCAGCGGGCATAGGTGCTTTTACCCAGGCAGATGGTCAGCACGTCGCGAGGG 344
Query 35706 ATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCAGGATGC-- 35763
|| |||||| | || || ||||| ||||| |||||| ||| ||||| || |||||
Sbjct 345 ATACGGAAGAACTCCACGGTGCGCGCCAGGGCGAAGGAGTTGGGCGGGAT---GATGCAC 401
Query 35764 -TGTCAGCCTTAACCGGCTGC-AGGCACTTGGGATCGAAGTTCTTCGGATCAACCACTGC 35821
||| ||| | || | | | || ||| |||||||| |||||||| || | ||
Sbjct 402 ACGTCGCTCTTGA-CGTCGACGAAGCTCTTTTCGTCGAAGTTTTTCGGATCGACGATCGC 460
Query 35822 GCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCACGCACGTCATAACCATACGA 35881
|||||||||||||| || | | |||||||| ||||||||| || |||||
Sbjct 461 CGAATTGATGTTGGTGAACACCTTGAATTCATCGGCGCAACGCACGTCGTAGCCATAGCT 520
Query 35882 CGAGTTGCCGTACGAGATAACGTGCT 35907
|| ||||||||| || ||| |||
Sbjct 521 GGAAACGCCGTACGAAATCACGCGCT 546
>seq2733
Length=8656
Score = 192 bits (212), Expect = 1e-43
Identities = 226/303 (75%), Gaps = 2/303 (1%)
Strand=Plus/Minus
Query 35454 GTCACACC-CGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTC 35512
|||||||| ||| || ||||| ||||| ||||| |||||||| || || |||| || |
Sbjct 7874 GTCACACCTCGT-TGTCCCTGATATTTCCCGCCACGATCCTTATAAGAAGTTTCACACAC 7816
Query 35513 CTCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGG 35572
|| ||||| || |||||||||||||| || ||||| || || || | |||||| ||
Sbjct 7815 TTCATCACTTTCAAAAAACAGCATCTGAGCAACACCCTCACCTGCATAAATACGCGCTGG 7756
Query 35573 CAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGG 35632
|| |||||||| || || || | || ||||| ||||||||||| || ||||||||
Sbjct 7755 CAAATTGGTAGTATTTGAAAATTCTAACGTAACATGGCCTTCCCACTCTGGCTCCAGCGG 7696
Query 35633 CGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAG 35692
||| || || || || ||||| ||||| || |||||| ||||||| ||| | ||
Sbjct 7695 CGTGACATTAACAATAATACCGCAGCGTGCATAGGTGGATTTACCCAGACAAATTGTTAG 7636
Query 35693 GACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGG 35752
|| ||||| ||||| ||||| || || ||||| || |||| ||| || ||| || ||
Sbjct 7635 TACATTGCGTGGAATACGGAAATACTCTACCGTACGGGCCAAAGCAAATGAGTTAGGTGG 7576
Query 35753 AAT 35755
|||
Sbjct 7575 AAT 7573
>seq17968
Length=506
Score = 129 bits (142), Expect = 1e-24
Identities = 76/79 (96%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 120226 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGA 120285
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 253 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGA 194
Query 120286 TCCCTGATGCCGGCACCAT 120304
| |||| ||||||||||||
Sbjct 193 TTCCTGGTGCCGGCACCAT 175
>seq15391
Length=1804
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 247003 GTGCCAGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCG 247062
|| |||| ||||||||||||||||||||||||||||| || || | || || || || |
Sbjct 1660 GTTCCAGGCGTGCGATGATTTCGGAGTTCATGCTGCGGTGATGATTGCGAGCCACCTCGG 1601
Query 247063 CGATGCGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCTG 247121
| |||||||| ||||| || || |||| ||| ||||| || ||||| || | ||||||
Sbjct 1600 CAATGCGTTCCCGCATTCCGTCTGGCAGACGTACGACGAATTTGTCAGCCGTACGGCTG 1542
>seq18487
Length=4867
Score = 100 bits (110), Expect = 5e-16
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 247006 CCAGACGTGCGATGATTTCGGAGTTCATGCTGCGATGGTGCGTACGGGCAACGTCCGCGA 247065
|||| ||||| ||||| || |||||||||||||| ||||| | || || || || ||||
Sbjct 4592 CCAGGCGTGCAATGATCTCCGAGTTCATGCTGCGGTGGTGGTTGCGTGCTACCTCGGCGA 4533
Query 247066 TGCGTTCGCGCATGCCATCCGGCAAACGCACGACAAACTTGTCGGCGCTGCGGCT 247120
|||| || ||||| || || |||| || ||||| |||||||| || |||||||
Sbjct 4532 TGCGCTCACGCATCCCGTCTGGCAGGCGAACGACGAACTTGTCAGCAGTGCGGCT 4478
>seq10015
Length=7542
Score = 98.7 bits (108), Expect = 2e-15
Identities = 75/85 (88%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 120228 GCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGA-T 120286
||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| |
Sbjct 2170 GCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGAAT 2111
Query 120287 CCCTGATGCCGGCACCATATTCTCT 120311
|| || |||||||||||| ||||||
Sbjct 2110 CCGTG-TGCCGGCACCAT-TTCTCT 2088
>seq21746
Length=2732
Score = 93.3 bits (102), Expect = 7e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 122605 CGGGTCGTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCGAG 122664
||||||||||||||||||||||||||| ||||||||| ||||||| |||||||
Sbjct 1521 CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCGAA 1462
Query 122665 TCCAACACGACCCACCAGTTT 122685
||| ||||||||||||| |||
Sbjct 1461 TCCCACACGACCCACCATTTT 1441
>seq15155
Length=4091
Score = 91.5 bits (100), Expect = 2e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 122603 TTCGGGTCGTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCG 122662
|| |||||||||||||||||||||||||| ||||||||| ||||||| ||||||
Sbjct 2503 TTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGTAGGTTCG 2562
Query 122663 AGTCCAACACGACCCACCAGTTT 122685
| ||| ||||||||||||| |||
Sbjct 2563 AATCCCACACGACCCACCATTTT 2585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825599720216520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |