Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4839 143 2e-29 seq20241 113 3e-20 seq5365 102 5e-17 seq14731 91.5 1e-13 seq11297 82.4 5e-11 seq9861 82.4 5e-11 >seq4839 Length=4080137 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||||||||| | ||| || ||||| ||||| ||||| || Sbjct 529872 CCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAC 529813 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| || || ||||| ||||| || | |||||||| | || Sbjct 529812 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 529753 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 529752 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 529693 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 529692 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 529646 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| ||||| || Sbjct 528732 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAC 528673 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| || || ||||| |||||||| | ||||||||| | || Sbjct 528672 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 528613 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| || || | || || |||||| | || | ||| ||| ||| || Sbjct 528612 ATGCCCTCTTTTTCCTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 528553 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || |||||||| || || | |||||| || ||||||||||| Sbjct 528552 TCCAGAGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 528506 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 528960 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 528901 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || ||||| || ||||| | |||||||| | || Sbjct 528900 AGAGTGCGGCCATCTTCCAGCTGTTTCCCGGCAAAAATCAGCCTCTGCTGGTCAGGGGGG 528841 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 528840 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 528781 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 528780 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 528734 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 529416 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 529357 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || ||||| ||||| || | |||||||| | || Sbjct 529356 AGAGTGCGGCCATCTTCCAGCTGTTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 529297 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 529296 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 529237 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 529236 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 529190 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 529188 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 529129 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || || ||||||| | |||||||| | || Sbjct 529128 AGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGGGGG 529069 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 529068 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 529009 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 529008 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 528962 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 529644 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 529585 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || || ||||||| | |||||||| | || Sbjct 529584 AGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATCAACCTCTGCTGGTCAGGGGGG 529525 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 529524 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 529465 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 529464 TCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 529418 >seq20241 Length=2711202 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||||||||| | ||| ||| ||||| ||||| || || || Sbjct 1753128 CCTCCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 1753187 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| || || || || ||||| || | |||||||| | || Sbjct 1753188 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 1753247 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || ||||| || | || || || ||| | || | ||| ||| ||| || Sbjct 1753248 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 1753307 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 1753308 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1753354 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| || || || || |||| |||| Sbjct 1753371 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1753430 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || ||||| || | |||||||| | || | || ||||| || Sbjct 1753431 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 1753490 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 1753491 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1753550 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 1753551 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1753582 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||| ||||| ||||| || || || || |||| |||| Sbjct 1753599 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1753658 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| || || || || ||||| || | |||||||| | || | || ||||| || Sbjct 1753659 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCC 1753718 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||| ||| || || | ||| |||||| Sbjct 1753719 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1753778 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||| || ||||||||||| Sbjct 1753779 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1753810 >seq5365 Length=1496801 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||| | ||| || |||||||| || || |||| |||| Sbjct 701821 AGCACCAAGTGCAGAGTGGACTCTTCCTGGATATTATAGTCTGACAGAGTGCGGCCATCC 701880 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 | ||| || || || | ||| ||||| || |||||||| | || ||||||||||| Sbjct 701881 TTCAGCTGTTTGCCCGTGAAAATCAGACGCTGCTGGTCAGGTGGACTGCCCTCCTTGTCT 701940 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| |||||| || || | | ||| ||| ||||| || | || |||| Sbjct 701941 TGGATTTTAGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCGATCTCTAGAGTGATGG 701998 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| | | |||||| |||||||||||||| Sbjct 701999 TCTTGCCCATCAAGGTCTTCACAAAGATCTGCAT 702032 >seq14731 Length=2762340 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821 ||||| || || |||| ||| |||||| ||| |||| | ||| || | | || | Sbjct 1525440 CCTCAACACAAGATGAAGTGTGGACTCCTTTTGAGTGTTGTGGTCAGACAAAGTACGTCC 1525499 Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881 ||| ||||||||||| | || |||||||||| ||||||||| | | | || ||||| Sbjct 1525500 ATCTTCCAGTTGCTTGCATGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTT 1525559 Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941 ||| | || || || || | |||| || || ||||| || | || || Sbjct 1525560 GTCCTGTACCTTGGCCTTTACATTTTCTATTACATCCGAGGGTTCGACCTCGAGAGTGAT 1525619 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 |||||| ||||| |||||||| || || ||||||| Sbjct 1525620 GGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCA 1525654 >seq11297 Length=1864957 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/202 (69%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 34775 TGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGC 34834 |||| |||| |||||| ||||||| ||||| | | | || |||| ||||||||| Sbjct 1109655 TGAAGGGTGGACTCCTTTTGAATGTGGTAGTCAAACAAAGTACGTCCATCTTCCAGTTGC 1109714 Query 34835 TTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTT 34894 || || || |||||||||| ||||||||| | | | || |||||||| | || || Sbjct 1109715 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGGGAAATTCCTTCCTTGTCCTGGATCTTA 1109774 Query 34895 TGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTG 34954 || || | |||| | || || ||||| || | || |||||| |||| || Sbjct 1109775 GCCTTTACATTTTCTATTGTATCCAAGGGTTCGACCTCGAGAGTGATGGTC-TTCCTGTC 1109833 Query 34955 AGGGTCTTTACAAAGATCTGCA 34976 |||||||| | || ||| ||| Sbjct 1109834 AGGGTCTTCATGAAAATCCGCA 1109855 >seq9861 Length=3422124 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| | ||| || | | || |||| ||| ||||||| || || || Sbjct 2119767 CTCCTTTTGAATGTTGTGGTCAGACAAAATACGTCCATCTTCCCGTTGCTTGCCAGCAAA 2119708 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 | |||||||||||||||| || | | ||||| || | || || || || Sbjct 2119707 GGTCAGTCGTTGCTGGTCAGAAGGAATTACTTCCTTATCTTGGATCTTGGCCTTTACATT 2119648 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||||| || || ||||| || | || |||||||| || || || |||| || Sbjct 2119647 TTCTATCGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCTGTCCGGATCTTCAC 2119588 Query 34966 AAAGATCTGCATGATAGTGG 34985 ||| |||||||| | |||| Sbjct 2119587 AAAAATCTGCATCCTGGTGG 2119568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325570888401347