Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq9203 425 1e-114
>seq9203
Length=13179
Score = 425 bits (470), Expect = 1e-114
Identities = 690/985 (70%), Gaps = 6/985 (1%)
Strand=Plus/Minus
Query 21742 TAGCGAGGTCTCTGTTTAACTTCGGTATAAATCCGGCCAATGTACTCGCCCAAAACTCCG 21801
|| || ||||| ||||| || || || || || || || || || || |||| || ||
Sbjct 11513 TACCGCGGTCTTTGTTTTACCTCAGTGTATATGCGCCCGATATATTCACCCAGCACACCA 11454
Query 21802 ATACCAATGAGCTGCACACCACCGAGAAAAAGTATTGATACCAGCAATGATGGATAACCG 21861
||||| || | || | ||||| ||||| || || || || || | |||||||||||
Sbjct 11453 ATACCTATCAATTGAATGCCACCAAGAAACAGAATGGAGACGAGTAGCGATGGATAACCA 11394
Query 21862 CGCACAGGATTCCCGAATGCAAGCGTATCAATGATCATCCAGGCACCGTACAGGAAAGC- 21920
|||||| ||| || | || ||||||| | ||| || ||| |||| || |
Sbjct 11393 GGCACAGCATTACCCCAGATAACTTTATCAATTACCATGAAGCTACCATACAAAAATGAG 11334
Query 21921 CAGGCCTGCAACGAACAGGCCAATGTACGTCCACATGCGTAACGGAAATGTTGAGAAGCT 21980
|||| || || |||| || | || ||||| | | || || | | ||| |||||
Sbjct 11333 CAGGTA-GCCACAAACAACCCTAAATATGTCCATACTCTTAGAGGTACAGATGAAAAGCT 11275
Query 21981 GGTAATCCCTTCAAGCGCCAGGTTCCAGAGCTTCCAGCCATTAAACTTAGTGCTGCCAGC 22040
||| || ||||||| |||||| ||||| | ||||||||||||||||| | |||||
Sbjct 11274 GGTTATTCCTTCAATCGCCAGATTCCATAATTTCCAGCCATTAAACTTTGAATCCCCAGC 11215
Query 22041 AACACGCTCAGCGCGAGCATATTCAACAACATCTGTACTCCCACCAACCCAGCTCAATAC 22100
| | || || | || |||||||| | || || | || | |||| |||||
Sbjct 11214 AGACCTTTCTGCTCTAGAGTATTCAACCAGTTCAATATTTCCGCTTGCCCATGACAATAT 11155
Query 22101 TCCTTTCATGAACAGGTTGCGTTCTGGTAATAATTTAATGTTTTCCACAACTCCGCGAGA 22160
|||||||| |||| ||||| || || | | |||| ||||| || | | | ||
Sbjct 11154 CCCTTTCATAAACAAATTGCGCTCAGGCAGCAGCTTAACATTTTCGACTGCCTCTCTTGA 11095
Query 22161 CATTAGTCGGAAATCGCCGACGTTCTCCTCAATCTTTGGATTGCTTATTTTATTGTGAAG 22220
||||||||||||||| || || ||||| ||||| | || | || |||||||||||
Sbjct 11094 CATTAGTCGGAAATCACCTACATTCTCTTCAATTCTCGGCGTACTGATTTTATTGTGGCA 11035
Query 22221 TTTATAGAACCACTCAGCAGTCATGCGCTTCAGTCTTCCGTCTGTAGAACGGTCTGAGCG 22280
| |||| |||||||| || || | | |||| | ||| |||| || || | ||
Sbjct 11034 TCTATAAAACCACTCGGCTGTTTTCCTTTTCAACCAGTTTTCTTTAGAGCGATCAGTACG 10975
Query 22281 CTTAGCCAGTACCATATCAGCACCTGCCTGCCACTTTTCAATAAGATGAGGGATAACCTC 22340
||| || | || | |||||| ||| |||||| ||| |||||| | || || || ||
Sbjct 10974 CTTGGCTAACACTACATCAGCCCCTAACTGCCATTTTCTAATAAGCTCTGGAATTACTTC 10915
Query 22341 AATCGGGTCCTGCAGATCGACATCAATAGGAATTACAGCATCGCCGCTTGCATGGTCTAA 22400
||| || ||||| ||||| |||||||| |||||||||||||| || | |||| ||||
Sbjct 10914 AATGGGATCCTGAAGATCTACATCAATTGGAATTACAGCATCTCCAGTCGCATATTCTAT 10855
Query 22401 CCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTGTAAATGACAGCGGAACAACTAG 22460
|| ||||||| ||||| |||||||| || || || || || |||| | |||||
Sbjct 10854 ACCAGCAAATAGCGCTGGCTCTTTACCGAAATTTCGGGTGAAGCTTAGCGCCATCACTAG 10795
Query 22461 CGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTGTGGCATCTTTACTTCCGTCATT 22520
|||| | || |||||||| ||||||| ||||| | ||| ||||||||
Sbjct 10794 ACAATCTGCAGTCGCATATTTATTAATAATCAACTCTGTTGCATCGTGACTACCGTCATT 10735
Query 22521 TATGAATACAATTTCTACTTCATA-TGGCTTCAACTCTTGGAATTCACGTACCGTTTTAT 22579
|||||| | |||||||||||||| | || ||||||||| | |||||| || | |||||
Sbjct 10734 TATGAAGATTATTTCTACTTCATACTCGC-TCAACTCTTTGTTTTCACGAACGGCTTTAT 10676
Query 22580 AGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGAACGACAAGAGATATTTTCATTT 22639
|||| | |||||| || |||||||||||||| ||||| || || | |||||||||||||
Sbjct 10675 AGAAGATAGGTATTGCATCTTCTTCATTGAAAACAGGTACAACCAATGATATTTTCATTT 10616
Query 22640 CGCATCCCTAAAGACAATGAACTTTGAATAGACGAAACCGCAC-ACCAGACTGATGGCGG 22698
||| |||| ||||| | ||||| || | ||| || ||| | || || || || |
Sbjct 10615 TTTATCTTTAAAAACAATCAGTTTTGAGTAAAAGAATCC-CACAATCAAGCTAATTGCAG 10557
Query 22699 AGAAGGTGATAAGAGTGACTATTGG 22723
| || || || || || | |||||
Sbjct 10556 AAAATGTTATCAGCGTTAAAATTGG 10532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127057643026320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |