Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_022752.1 Length=42665 Score E Sequences producing significant alignments: (Bits) Value seq698 627 2e-175 >seq698 Length=3433 Score = 627 bits (694), Expect = 2e-175 Identities = 765/1041 (73%), Gaps = 2/1041 (0%) Strand=Plus/Minus Query 7533 ATGGCAATTACCACTATTGGCGATATCGTAACCGGCAACATCCCTGTACTGGCGTCTTAT 7592 ||| | || ||||| || || ||||| | ||||| |||||||| || ||| | || || Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 7593 ATGACCGAAGACCCGGTATAGAAAACCGCGTTTTTTGACTCCGGTATCCTCACCCCTACC 7652 ||||| |||||||||| | || |||||||| || || ||||| || |||||||| ||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 7653 CCGTATGCGGCTGAGATTGCTAACGGTCCGTCAAACATTGCTAACCTGCCGTTCTGGAAA 7712 ||||| || |||||||| || ||| ||||| ||||| || ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 7713 GCTATCGATACCTCTATCGAACCTAACTATTCGAACGATGTGTATCAGGATATCGCTACT 7772 | ||||| | || |||| || ||||| |||||||||||||| || | || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 7773 CCGCGCGCTATTCAGACTGGTGAAATGATGGCCCGCGTTGCATATCTGAACGAAGGTTTC 7832 |||||| ||| | || || || ||| ||||||| ||||| || || ||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 7833 GGTCAGGCTGACCTTACTGTCGAACTGACTAGCCAGAATCCATTGCAGTCCGTAGCCTCA 7892 || ||||| ||||| |||||||| ||||| ||| |||| || |||| ||||| || | Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 7893 CGCCTGGATAACTTCTGGCAGCGTCAGGCGCAGCGCCGTCTTATCGCAACAGCACTCGGC 7952 |||||||| |||||||||||||| ||||| |||||||| || | || || | || || Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 7953 CTGTACAACGACAACGTGGCCGCTACCGACGAATACCATGAGCAGAACGACATGGTAGTA 8012 | |||||||||||| | | ||| || || | | |||| |||||||||||||| | Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 8013 GACGTGTCAGCTACTCTTGGCTTTGACGCAGGCGCATTTATTGATGCTACCCAGACTATG 8072 ||||| || ||| || || || || || ||||| || || || || |||||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 8073 GGCGACGCATTGATGGGCAACGGTGGTGAGGTTCTCGGTGCTATTGCAATGCACAGCTTC 8132 || || || |||||||| | || || |||| ||||| | || || |||| |||||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631 Query 8133 GTATATGCTCAGGCCCGTAAAGCCCAGCTTATCGATTTCATTCGTGATGCTGAGAACAAC 8192 || |||| | ||||| ||| | ||||| ||||| ||||| ||||| |||||| Sbjct 630 GTGTATGGCGACATGCGTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACAAC 571 Query 8193 ACCATGTTCGCTACCTACCAGGGCTATCGCGTCATCGTTGATGACAGCATGACCGTAGTA 8252 ||| | |||| |||||||||||||| ||| | | | |||||| |||||||| | Sbjct 570 ACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGATC 511 Query 8253 GGC-CAGGGTGCACAGCGCAAGTTCATCTCCATCATCTTCGGTAGAGGCGCTATTGGTTA 8311 ||| | || || | ||||||||||||| | | ||||| ||| || ||||| ||||| Sbjct 510 GGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGTTA 452 Query 8312 CGGCGAAGGTTCCCCTACAAATCCGCTGGCGTATGAGCGCGAAGAATCACGCGGTAACGG 8371 ||| ||||| |||||| |||| || || |||||| |||| | ||||||||||| Sbjct 451 CGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAACGG 392 Query 8372 CGGTGGTGTAGAAACGCTGTGGACTCGTAAGACTTGGTTGCTGCATCCGTTTGGTTACAG 8431 || || || ||| |||||||| || ||||| ||| ||||||| ||| | || ||||| Sbjct 391 TGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTACAG 332 Query 8432 ATTCACCAGCGCAGTAATCACCGGCAACGGCACCGAGACTATCTCACGTTCCGCTAGCTG 8491 ||| || ||||||||||||||||||||||| | | || || || ||| Sbjct 331 TTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGCGCTCTGCCTCCTG 272 Query 8492 GCAGGACCTGGCTAACGCAACCAACTGGAATCGTGTAGTAGACCGTAAGCACGTACCGAT 8551 |||||| ||||| || ||||||||||| || || | || || |||||| | ||||| Sbjct 271 GCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCCGAT 212 Query 8552 TGCTTTCCTGGTAACTGGCGT 8572 || |||||||| ||||| || Sbjct 211 CGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136356650284062