Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_022754.1
Length=42749
Score E
Sequences producing significant alignments: (Bits) Value
seq698 679 0.0
>seq698
Length=3433
Score = 679 bits (752), Expect = 0.0
Identities = 779/1043 (75%), Gaps = 6/1043 (1%)
Strand=Plus/Minus
Query 7224 ATGGCAATTACCACTATTGGCGATATCGTAACCGGCAACATCCCTGTACTGGCGTCTTAT 7283
||| | || ||||| || || ||||| | ||||| |||||||| || ||| | || ||
Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171
Query 7284 ATGACCGAAGACCCGGTAGAGAAAACCGCGTTTTTTGACTCCGGTATCCTCACCTCTACC 7343
||||| |||||||||| || || |||||||| || || ||||| || |||||| | |||
Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111
Query 7344 CCGTATGCGGCTGAGATTGCTAATGGTCCGTCCAACATCGCTAACCTGCCGTTCTGGAAA 7403
||||| || |||||||| || || ||||| |||||||| ||| | |||| ||||||
Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051
Query 7404 GCTATTGATACCTCTATCGAGCCTAACTATTCGAACGATGTGTATCAGGATATTGCTACC 7463
| || || | || ||||||| ||||| |||||||||||||| || | ||
Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991
Query 7464 CCGCGCGCTATCCAGACCGGGGAAATGATGGCCCGCGTTGCGTATCTGAACGAAGGTTTT 7523
|||||| || | ||||| || ||| ||||||| |||||||| || ||||||||||||
Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931
Query 7524 GGTCAGGCTGACCTTACTGTCGAACTGACTAGCCAGAACCCGTTACAGTCTGTGGCATCC 7583
|| ||||| ||||| |||||||| ||||| ||| |||||||| | || || || || |
Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871
Query 7584 CGCCTGGACAACTTCTGGCAACGCCAGGCACAGCGCCGTCTGATTGCGACCGCCCTCGGT 7643
|||||||||||||||||||| |||||||| |||||||| ||| | || ||| | || |||
Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811
Query 7644 CTGTACAACGACAACGTGTCCGCTACTGATGCGTATCACGAGCAGAACGACATGGTGGTG 7703
| |||||||||||| | ||| |||||||||| || ||||||||||||||| |
Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751
Query 7704 GACGTTTCCGCTACCCTGGGTTTCGACGCCGGCGCTTTCATTGATGCTACTCAGACTATG 7763
|||||||||||| | |||||||| || ||||| ||||| || || || ||||| |||
Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691
Query 7764 GGTGACGCATTGATGGGTAACGGCGGTGAGGTTCTTGGTGCTATCGCAATGCACAGCTTC 7823
||||| || |||||||| | ||||| |||| || || | || || |||| ||||||
Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631
Query 7824 GTATACGC--ACAGGCCCGTAAAGCCCAGCTTATCGATTTCATCCGTGATGCGGATAACA 7881
|| || | ||| || |||| ||| | ||||| ||||||||||| || || ||||
Sbjct 630 GTGTATGGCGACATGC--GTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACA 573
Query 7882 ACACCATGTTCGCCACTTACCAGGGCTATCGCGTCATCGTCGACGACAGCATGACCGTAG 7941
||||| | |||| || ||||||||||| ||| | | |||| ||| ||||||||
Sbjct 572 ACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGA 513
Query 7942 TAGGC-CAGGGTGCACAGCGCAAGTTCATCTCCATCATCTTCGGTCGAGGCGCTATTGGT 8000
| ||| | || || | ||||||||||||| | | ||||| |||| || ||||| |||
Sbjct 512 TCGGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGT 454
Query 8001 TACGGCGAAGGTTCCCCTACAAATCCGCTGGCGTATGAGCGCGAAGAATCACGCGGTAAC 8060
||||| ||||| |||||| |||| || || |||||| |||| | |||||||||
Sbjct 453 TACGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAAC 394
Query 8061 GGCGGTGGTGTAGAAACGCTGTGGACTCGTAAGACTTGGTTGCTGCATCCGTTTGGTTAC 8120
|| || || || ||| |||||||| || ||||| ||| ||||||| ||| | || |||
Sbjct 393 GGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTAC 334
Query 8121 AGCTTCACCAGCGCAGTAATCACCGGCAACGGCACCGAGACTATCGCACGTTCCGCTAGC 8180
|| ||| || ||||||||||||||||||||||| | | || || || |
Sbjct 333 AGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGCGCTCTGCCTCC 274
Query 8181 TGGCAGGACCTGGCTAACGCAACCAACTGGAATCGTGTAGTAGACCGTAAGCACGTACCG 8240
|||||||| ||||| || ||||||||||| || || | || || |||||| | |||
Sbjct 273 TGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCCG 214
Query 8241 ATTGCTTTCCTGGTAACTGGCGT 8263
|| || |||||||| ||||| ||
Sbjct 213 ATCGCCTTCCTGGTTACTGGTGT 191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136625352248166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |