Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_022754.1 Length=42749 Score E Sequences producing significant alignments: (Bits) Value seq698 679 0.0 >seq698 Length=3433 Score = 679 bits (752), Expect = 0.0 Identities = 779/1043 (75%), Gaps = 6/1043 (1%) Strand=Plus/Minus Query 7224 ATGGCAATTACCACTATTGGCGATATCGTAACCGGCAACATCCCTGTACTGGCGTCTTAT 7283 ||| | || ||||| || || ||||| | ||||| |||||||| || ||| | || || Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 7284 ATGACCGAAGACCCGGTAGAGAAAACCGCGTTTTTTGACTCCGGTATCCTCACCTCTACC 7343 ||||| |||||||||| || || |||||||| || || ||||| || |||||| | ||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 7344 CCGTATGCGGCTGAGATTGCTAATGGTCCGTCCAACATCGCTAACCTGCCGTTCTGGAAA 7403 ||||| || |||||||| || || ||||| |||||||| ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 7404 GCTATTGATACCTCTATCGAGCCTAACTATTCGAACGATGTGTATCAGGATATTGCTACC 7463 | || || | || ||||||| ||||| |||||||||||||| || | || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 7464 CCGCGCGCTATCCAGACCGGGGAAATGATGGCCCGCGTTGCGTATCTGAACGAAGGTTTT 7523 |||||| || | ||||| || ||| ||||||| |||||||| || |||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 7524 GGTCAGGCTGACCTTACTGTCGAACTGACTAGCCAGAACCCGTTACAGTCTGTGGCATCC 7583 || ||||| ||||| |||||||| ||||| ||| |||||||| | || || || || | Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 7584 CGCCTGGACAACTTCTGGCAACGCCAGGCACAGCGCCGTCTGATTGCGACCGCCCTCGGT 7643 |||||||||||||||||||| |||||||| |||||||| ||| | || ||| | || ||| Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 7644 CTGTACAACGACAACGTGTCCGCTACTGATGCGTATCACGAGCAGAACGACATGGTGGTG 7703 | |||||||||||| | ||| |||||||||| || ||||||||||||||| | Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 7704 GACGTTTCCGCTACCCTGGGTTTCGACGCCGGCGCTTTCATTGATGCTACTCAGACTATG 7763 |||||||||||| | |||||||| || ||||| ||||| || || || ||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 7764 GGTGACGCATTGATGGGTAACGGCGGTGAGGTTCTTGGTGCTATCGCAATGCACAGCTTC 7823 ||||| || |||||||| | ||||| |||| || || | || || |||| |||||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631 Query 7824 GTATACGC--ACAGGCCCGTAAAGCCCAGCTTATCGATTTCATCCGTGATGCGGATAACA 7881 || || | ||| || |||| ||| | ||||| ||||||||||| || || |||| Sbjct 630 GTGTATGGCGACATGC--GTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACA 573 Query 7882 ACACCATGTTCGCCACTTACCAGGGCTATCGCGTCATCGTCGACGACAGCATGACCGTAG 7941 ||||| | |||| || ||||||||||| ||| | | |||| ||| |||||||| Sbjct 572 ACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGA 513 Query 7942 TAGGC-CAGGGTGCACAGCGCAAGTTCATCTCCATCATCTTCGGTCGAGGCGCTATTGGT 8000 | ||| | || || | ||||||||||||| | | ||||| |||| || ||||| ||| Sbjct 512 TCGGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGT 454 Query 8001 TACGGCGAAGGTTCCCCTACAAATCCGCTGGCGTATGAGCGCGAAGAATCACGCGGTAAC 8060 ||||| ||||| |||||| |||| || || |||||| |||| | ||||||||| Sbjct 453 TACGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAAC 394 Query 8061 GGCGGTGGTGTAGAAACGCTGTGGACTCGTAAGACTTGGTTGCTGCATCCGTTTGGTTAC 8120 || || || || ||| |||||||| || ||||| ||| ||||||| ||| | || ||| Sbjct 393 GGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTAC 334 Query 8121 AGCTTCACCAGCGCAGTAATCACCGGCAACGGCACCGAGACTATCGCACGTTCCGCTAGC 8180 || ||| || ||||||||||||||||||||||| | | || || || | Sbjct 333 AGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGCGCTCTGCCTCC 274 Query 8181 TGGCAGGACCTGGCTAACGCAACCAACTGGAATCGTGTAGTAGACCGTAAGCACGTACCG 8240 |||||||| ||||| || ||||||||||| || || | || || |||||| | ||| Sbjct 273 TGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCCG 214 Query 8241 ATTGCTTTCCTGGTAACTGGCGT 8263 || || |||||||| ||||| || Sbjct 213 ATCGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136625352248166