Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq12372 152 1e-32
seq7504 152 1e-32
seq4096 100 8e-17
seq9311 98.7 3e-16
>seq12372
Length=38393
Score = 152 bits (168), Expect = 1e-32
Identities = 196/268 (73%), Gaps = 12/268 (4%)
Strand=Plus/Minus
Query 23450 TGTCCACCACAATTTCGGTGGTGTAG---TTGGTCGCGCCGTCTTTTTCCCACTTGCGTG 23506
|||| || | ||||| |||||||| ||| | |||||| || ||||||| ||| |
Sbjct 38295 TGTCGACAATGATTTCAGTGGTGTAACGCTTGAT---GCCGTCCTTCTCCCACTCGCGGG 38239
Query 23507 TCTGCAGCTTGCCGATGATCGCGCATTCACTTCCCTTGCGCAGATACTCGCCGGCAATCT 23566
| ||||||||||| ||| ||||| || |||||||| ||||||||||| ||||
Sbjct 38238 TTTGCAGCTTGCCTTCGATGTAGCATTGGGAACCTTTGCGCAGGTACTCGCCGGCGATCT 38179
Query 23567 CGGCGACCTTGCCGAAGAACACGACGCGGTGCCATTCGGT---CTTTTCCTTGCGCTCGC 23623
|||| ||||||||||| ||| ||||||||||| ||||| || |||| || |
Sbjct 38178 CGGCCACCTTGCCGAACAACGACACGCGGTGCCACTCGGTGCGCTCGACCTT---CTGCC 38122
Query 23624 CGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGC 23683
|||| |||||||| |||| || ||||||||||||| ||| || || | ||
Sbjct 38121 CGGTTTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTAGTTACCGCGTTGC 38062
Query 23684 CGTTTTGCAGGTAGCGCACTTCCGGGTC 23711
||||| ||||||| || ||||| |||||
Sbjct 38061 CGTTTGGCAGGTAACGGACTTCGGGGTC 38034
>seq7504
Length=9783
Score = 152 bits (168), Expect = 1e-32
Identities = 196/268 (73%), Gaps = 12/268 (4%)
Strand=Plus/Minus
Query 23450 TGTCCACCACAATTTCGGTGGTGTAG---TTGGTCGCGCCGTCTTTTTCCCACTTGCGTG 23506
|||| || | ||||| ||||||||| ||| | ||||||||||||||||| || |
Sbjct 3110 TGTCAACGATGATTTCAGTGGTGTAGCGCTTGAT---GCCGTCTTTTTCCCACTCACGGG 3054
Query 23507 TCTGCAGCTTGCCGATGATCGCGCATTCACTTCCCTTGCGCAGATACTCGCCGGCAATCT 23566
||||||||||||| ||| ||| | || |||||||| ||||||||||||||||
Sbjct 3053 TCTGCAGCTTGCCTTCGATGTAGCACTGCGAACCTTTGCGCAGGTACTCGCCGGCAATCT 2994
Query 23567 CGGCGACCTTGCCGAAGAACACGACGCGGTGCCATTCGGT---CTTTTCCTTGCGCTCGC 23623
| || ||||||||||| | | || |||||||||||||| || |||| || ||
Sbjct 2993 CAGCAACCTTGCCGAACAGCGACACACGGTGCCATTCGGTACGCTCGACCTT---CTGGC 2937
Query 23624 CGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGC 23683
| | ||||||||| |||| || || |||||||| | |||| ||||||| |
Sbjct 2936 CCGACTGCTTGTCGGTCCATTGCTCGCTGGTTGCCAGGCTCAGGTTGGTCACGGCATTAC 2877
Query 23684 CGTTTTGCAGGTAGCGCACTTCCGGGTC 23711
|||| |||||||||| ||||| || ||
Sbjct 2876 CGTTGGGCAGGTAGCGGACTTCGGGATC 2849
>seq4096
Length=1707
Score = 100 bits (110), Expect = 8e-17
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 21062 ATGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATC 21121
|||||| || |||||||||||||||||||||| | ||||||||||||| ||||||||||
Sbjct 1585 ATGGCGCGCCTGACAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTATC 1526
Query 21122 CAGCTGAGCTACGGG 21136
|| ||||||||| ||
Sbjct 1525 CAACTGAGCTACAGG 1511
>seq9311
Length=16340
Score = 98.7 bits (108), Expect = 3e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 21063 TGGCGACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCC 21122
||||| |||| ||||| ||||||||| |||| | ||||||||||||| |||||||||||
Sbjct 3982 TGGCGCACCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTATCC 3923
Query 21123 AGCTGAGCTACGGG 21136
||||||||||||||
Sbjct 3922 AGCTGAGCTACGGG 3909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139232401066556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |