Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq17400 168 3e-37 >seq17400 Length=8471 Score = 168 bits (186), Expect = 3e-37 Identities = 233/326 (71%), Gaps = 0/326 (0%) Strand=Plus/Minus Query 37820 GGCTTTGATCAGATTGATTGGGTTATTAATGAAATTAAAACTAACCCTACATCACGCCGT 37879 || ||||| |||||| ||| | |||||||| || | ||| || || | |||||||| Sbjct 4392 GGGTTTGACCAGATTTCCTGGCTAATTAATGAGATCAGAACCAATCCGAATTCACGCCGG 4333 Query 37880 CTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGCAGCATTGCCACCTTGTCAT 37939 || || || ||| |||||||| | |||| ||| |||||||||||||| ||| Sbjct 4332 CTCATCGTTTCTGGCTGGAATCCTAAAGAAGCCAGCCAGGTTGCATTGCCACCTTGCCAT 4273 Query 37940 ACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATATCAACGTAGT 37999 || |||| ||||| |||||| | ||||| ||| | || ||| | || || || ||| Sbjct 4272 ACCCTGTTTCAGTTTTTTGTACAAAATGGCAAATTGTCTTGCCAGCTTTACCAGCGCAGT 4213 Query 38000 GCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCTTACACATATC 38059 || ||| | ||| | ||||| || || |||||||| || ||||| |||| || ||||| Sbjct 4212 GCCGATGTATTCCTGGGTGTACCCTTCAATATTGCGAGTTATGCCCTGCTCACTCATATG 4153 Query 38060 GTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTGGACTGGTGGTGTAGTTCAC 38119 | ||| || |||| | |||||||||| ||||||||||| || |||| ||| Sbjct 4152 ATTGCTCAAGTCTGTGACCTTCAAGTTGGTGATTTTGTCTGGACCGGGGGTGATACACAC 4093 Query 38120 CTGTACAGTAATCACCTTGAGCAAGC 38145 ||||| || || |||||||||| Sbjct 4092 CTGTATGCCAACCATTTTGAGCAAGC 4067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248716466912329