Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq11692 84.2 2e-11 seq30076 82.4 8e-11 >seq11692 Length=22366 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19634 CAATCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCG 19693 || ||| | |||||||||| ||||||||| ||||||||||||| |||||||||||| Sbjct 13756 CATTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 13815 Query 19694 AGTCCAGGTGGAGGAG 19709 ||||||||| | |||| Sbjct 13816 AGTCCAGGTCGCGGAG 13831 >seq30076 Length=4501 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 19637 TCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCGAGT 19696 ||| | |||||||||| ||||||||| ||||||||||||| ||||||||||||||| Sbjct 3584 TCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAGT 3643 Query 19697 CCAGGTGGAGGAG 19709 |||||| | |||| Sbjct 3644 CCAGGTCGCGGAG 3656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545064262649040