Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_023700.1 Length=34553 Score E Sequences producing significant alignments: (Bits) Value seq556 134 3e-27 >seq556 Length=1149 Score = 134 bits (148), Expect = 3e-27 Identities = 126/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 23292 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 23351 ||||||||||||| ||||||||||| || || ||||| |||||||||||||||||| Sbjct 1 CGATGCAGGAAGCTACCGGCAAGGCAGTGAGCGAGACGGTTTCCGAGTTCTCCAAGCTGG 60 Query 23352 CCGACGAACCGGTCAAAGCCT-CGCAACAGCTCAACGAGAAATATCACTACCTGACCGCC 23410 |||| || || || ||||| | ||| || ||||| ||| | |||||||||||||| || Sbjct 61 CCGAAGACCCAGTGAAAGCATCCGCTGCA-CTCAATGAGCAGTATCACTACCTGACTGCT 119 Query 23411 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGG 23448 ||||||||| ||||| || || || || || ||||| Sbjct 120 TCGGTTTACTCCCAGATTGCAGCACTGGAGCAACAAGG 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110407717750590