Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_023717.1
Length=151924
Score E
Sequences producing significant alignments: (Bits) Value
seq30076 93.3 4e-14
seq17968 82.4 7e-11
>seq30076
Length=4501
Score = 93.3 bits (102), Expect = 4e-14
Identities = 131/183 (72%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 150001 TAGCTCAGTTGGTAGAGCGCTCGACCGATAATCGAGAGGTCACTGGTTCAAGTCCAGTAT 150060
||||||||| |||||||| ||| | ||||| |||| ||||||| |||||||
Sbjct 3591 TAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAGTCCAGGTC 3650
Query 150061 CCCCAACCATACACGGTGTGTAGCTCAGTTTGGTAGAGCGATTGCTTTGGGAGCATTAGG 150120
| | ||| | ||| ||||||| |||| ||||| ||| ||||||||||||| | |
Sbjct 3651 GCGGAGCCAATCTCGGGGTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGAGCAGGATG 3710
Query 150121 TCCGAGGTTCGAATCCTCGTACACCGACCACATTCTTGCGAGGTAGTTCAG-CGGTAGAA 150179
|| | |||||||||| | || ||||||| ||| | | ||| |||| ||||||
Sbjct 3711 TCAGGAGTTCGAATCCCCTCACCCCGACCATTTTCCGGGTCGTTAGCTCAGTTGGTAGAG 3770
Query 150180 CAG 150182
|||
Sbjct 3771 CAG 3773
>seq17968
Length=506
Score = 82.4 bits (90), Expect = 7e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 148132 TTGCTGGATTAGCTCAGTTGGTAGAGCAACTGATTTGTAATCAGAAGGTCGCGGGTTCGA 148191
|||| || |||||||| ||||||||||||||| |||||||||| ||||| |||||||||
Sbjct 253 TTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGA 194
Query 148192 ACCCTGCATCCAGCACCA 148209
|||| || ||||||
Sbjct 193 TTCCTGGTGCCGGCACCA 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 485842207468320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |