Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_023734.1
Length=35725
Score E
Sequences producing significant alignments: (Bits) Value
seq3336 145 2e-30
>seq3336
Length=1417
Score = 145 bits (160), Expect = 2e-30
Identities = 298/438 (68%), Gaps = 9/438 (2%)
Strand=Plus/Minus
Query 15690 GCTTTGGATCGGTGGAATCCAGACATTAAAGCGTCAGACGATGACTCTGAAAACGTGATC 15749
|| ||||| |||||||||||| || || ||| || | || ||| ||| |||
Sbjct 535 GCCTTGGAGCGGTGGAATCCATCGATCAAGGCGGCAAGCACGGA---TGACAACTCCATC 479
Query 15750 AACATCTTAGAGGTTATTGGTTACGACTGGTGGACCGATGGCGGCATCACTGGCAAGTCT 15809
| || | || ||||| | || |||||||| | || ||| | |||| |||
Sbjct 478 ACGATTTACGACCCGATTGGGTTTGATTGGTGGACGGGTGAGGGCGTAACTGCAAAGCGG 419
Query 15810 ATCAGCGCTCAACTCAAAAGATTTAACGGTG-CAGATAT-TGTC-GTTAATATTAACTCT 15866
||||||||| || ||| || ||||| ||| || || | || || || |||
Sbjct 418 ATCAGCGCTGCGCTTC---GATCTATCGGTGACAGTGATGTGACCGTGAAGATCAACAGC 362
Query 15867 CCTGGTGGTGATGTATTCGAAGGTTTGGCAATCTACAACATGCTGCGCGAATATTCTGGC 15926
|| || || || || || ||||| |||| ||||||||| |||||||||| | |||
Sbjct 361 CCAGGCGGCGACGTGTTTGAAGGGCTGGCCATCTACAACCTGCTGCGCGAGCACAAGGGC 302
Query 15927 CATGTGACGGTCAGAGTGCTTGGTATGGCTGCGAGCGCCGCATCATTTATTGCGATGGCT 15986
| |||||||| | | || || | || || ||||| || || || || |||||
Sbjct 301 AAAGTGACGGTGCAAATCCTCGGCCTCGCCGCCTCGGCCGCGTCGTTCATCGCTATGGCG 242
Query 15987 GCTGATGAAGTGAAGATTGCGCGCGCAGGCTTCTTTATGATTCACAATGCTTGGACCGGC 16046
||||||||| | |||| |||||||| ||||| | ||||||||||| |||||
Sbjct 241 GCTGATGAAATCCAGATCGCGCGCGCCGGCTTTCTGATGATTCACAACAGCTGGACGATG 182
Query 16047 GTTGGCGGTAACCGTAATGATATGCGTGAAGTGGCTGACTTCTTGGAGCAAATCGATGCA 16106
| | |||| |||| || || || || || || || |||||| | ||||| || || | |
Sbjct 181 GCCGCCGGTGACCGCAACGACATTCGAGAGGTCGCCGACTTCCTCGAGCAGATTGACGGA 122
Query 16107 ACCATCGCTGATATCTAC 16124
|| ||||||||||||||
Sbjct 121 ACACTCGCTGATATCTAC 104
Score = 129 bits (142), Expect = 1e-25
Identities = 322/486 (66%), Gaps = 10/486 (2%)
Strand=Plus/Minus
Query 15119 AACGCTGGCAAGACGATGGTACTTGAGCATGGCATGAAGTATAACGGCGTGACCATGAAC 15178
||||| ||||||| ||||| ||| ||| ||||||| | || | || |||||
Sbjct 1296 AACGCCGGCAAGATCATGGTGGCCGAGGCTGGGTTGAAGTACCAAGGGATCACGATGAAT 1237
Query 15179 CCAGAAGCGGCGCAAATGCTTGAGACGCGATCCTTTGAGATTGAGGAAATCTGTCGTTGG 15238
|| ||||| |||||||||||||| || | || || ||||| || || || || |||
Sbjct 1236 CCCGAAGCCTCGCAAATGCTTGAGTCGAGGTCGTTCAGCATTGAAGAGATGTGCCGGTGG 1177
Query 15239 TTTCGCGTATCGCCAATTATGATTGGGCACTTCGATAAGCAAAGCTCATGGGCCGCCTCT 15298
|| || || |||| | ||| | || ||| | |||||||| | |||||| ||
Sbjct 1176 TTCCGGGTGCCGCCCTTCATGGTCGGTCACATGGATAAGCAGTCCAGTTGGGCCAGTTCG 1117
Query 15299 GCTGAAGCGCAAGACTTACACTTTTTGAAATACACATTTAGACCGCTGCTAGTCAATATT 15358
| |||||||| || | ||||| ||| ||| || | |||||||| || || |||
Sbjct 1116 GTGGAAGCGCAGAACCTGCACTTCCTGACCAACAGTTTGCGCCCGCTGCTGGTGAACATT 1057
Query 15359 GAGCAAGAGATTTTACGCTGTCTTATCGGAAAAATTGATAGCGACAAGTATTACGTTGAG 15418
||||| ||||| || || || ||||| | ||| ||| ||| | || ||||
Sbjct 1056 GAGCAGGAGATCACCCGATGCCTGATCGGTGAGGCTGACGCTGACGAGTTCTTCGCTGAG 997
Query 15419 TTCAATGTCGAAGGCTTACTACGTGCAGACA-----GTAAAACGCGCTCTGAGTACTATT 15473
||| ||| |||||| | || || || |||| | |||| ||| |||| |
Sbjct 996 TTCGCTGTTGAAGGCCTGCTGCGCGCCGACAGCGCCGGTCGTGGCGC-CTG-GTACAA-- 941
Query 15474 CGTCTGGCCTGAATAACGGCTGGATAAATCGTGACGAAGTCCGGTCTAAAGAGAATATGC 15533
||| ||| | ||||||||||| || |||| || ||| | || || |||
Sbjct 940 -CACTGCTCTGCAAAACGGCTGGATGTGCCGCAACGAGGTGCGGCGTCTGGAAAACATGG 882
Query 15534 CGCCAATTGACGGCGGTGATAAGTACACAATTCAATCAGCACTTATCCCGCTTGATAAGG 15593
| ||||| ||||| |||| || ||| |||| || || ||| | |||||||| ||
Sbjct 881 CTCCAATCCCTGGCGGCGATACGTTCACTGTTCAGTCGGCGCTTGTACCGCTTGACCAGC 822
Query 15594 TGGGCA 15599
| ||||
Sbjct 821 TCGGCA 816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114156749916422
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |