Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_024204.1
Length=42764
Score E
Sequences producing significant alignments: (Bits) Value
seq698 746 0.0
>seq698
Length=3433
Score = 746 bits (826), Expect = 0.0
Identities = 797/1044 (76%), Gaps = 8/1044 (1%)
Strand=Plus/Minus
Query 7272 ATGGCAATTACTACTATTGGCAACATCGTAACTGGCAATATCCCTGTGCTGGCGTCTTAC 7331
||| | || || || || || || ||| | || || || ||||| |||||| | || |||
Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171
Query 7332 ATGACCGAAGACCCGGTAGAGAAAACCGCGTTTTTCGACTCCGGTATCCTTACTCCAACC 7391
||||| |||||||||| || || |||||||| ||||| ||||| || || || ||||||
Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111
Query 7392 CCGTACGCGGCCGAGATTGCTAATGGTCCATCCAACATCGCTAACTTGCCGTTCTGGAAA 7451
|||||||| || ||||| || || || || |||||||| ||| | |||| ||||||
Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051
Query 7452 GCCATCGATACCTCTATCGAACCTAACTATTCGAACGATGTGTATCAGGATGTTGCTACC 7511
| ||||| | || |||| || ||||| |||||||||||||| || || ||
Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991
Query 7512 CCGCGCGCTATTCAGACCGGTGAAATGATGGCCCGCGTTGCCTACCTGAACGAAGGTTTC 7571
|||||| ||| | ||||| || ||| ||||||| ||||| ||||| |||||||||||
Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931
Query 7572 GGCCAGGCCGACCTGACTGTCGAACTGACTAGCCAGAATCCGTTGCAGTCCGTAGCGTCT 7631
||||||||||||||||||||||| ||||| ||| |||| ||| |||| ||||| || ||
Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871
Query 7632 CGTCTGGATAACTTCTGGCAGCGCCAGGCCCAGCGTCGTCTGATTGCTACCGCCCTCGGT 7691
|| ||||| |||||||||||||||||||| ||||| || ||| | || ||| | || |||
Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811
Query 7692 CTGTACAACGACAACGTATCCGCTACTGATGCATATCACGAGCAGAACGACATGGTGGTC 7751
| |||||||||||| | ||| |||||||| | || ||||||||||||||| ||
Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751
Query 7752 GACGTTTCTGCAACTTCAGGCTTCGACGCAGGCGCATTCATCGACGCTACTCAGACTATG 7811
|||||||| || || || ||||| || ||||| ||||||||||| || ||||| |||
Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691
Query 7812 GGTGATGCGTTGATGGGTAACGGTGGTGAGGTTCTCGGTGCTATCGCGATGCACAGCTTC 7871
||||||||||||||||| | || || |||| ||||| | || ||| |||| ||||||
Sbjct 690 GGTGATGCGTTGATGGGGACTGGCGGCCAGGTGCTCGGCGTCATGGCGGTGCATAGCTTC 631
Query 7872 GTATATGCGCAGGCA--CGTAAAGCTCAGCTTATCGACTTCATCCGTGACGCTGAGAACA 7929
|| |||| || | || ||||| ||| | ||||||||||||||||||||||| ||||
Sbjct 630 GTGTATG-GC-GACATGCGTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACAACA 573
Query 7930 ACACCATGTTCGCCACCTACCAGGGCTACCGTGTTATCGTCGATGACAGCATGACCGTAG 7989
||||| | |||| ||||||||||||||||| | | |||||||| ||||||||
Sbjct 572 ACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGACCAGATGACCGTGA 513
Query 7990 TAGGC-CAGGGTGCGCAGCGCAAGTTCATCTCCGTCATCTTCGGCCAGGGCGCTATCGGC 8048
| ||| | || || | ||||||||||||| ||| ||||| || ||||| ||||||||
Sbjct 512 TCGGCACCGGCAGCTC-GCGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCTATCGGT 454
Query 8049 TATGGCGAAGGCAATCCCGAGATGCCGTTGGAATACGAGCGTGAAGCATCTCGCGCTAAC 8108
|| || |||||| || ||| || | |||||||| ||| |||||| ||||
Sbjct 453 TACGGTGAAGGCTCCCCTGAGCATCCAACCGCCTACGAGCGCCAAGAGGCTCGCGGTAAC 394
Query 8109 GGCGGCGGCGTTGAAACCCTGTGGACTCGTAAGACCTGGTTGCTGCATCCGTTCGGCTAC 8168
|| |||||||||||| ||||||| || ||||||||| ||||||| ||| ||||||||
Sbjct 393 GGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACCCGCTCGGCTAC 334
Query 8169 AGCTTCACGAGCGCCGTAATCACCGGCAACGGCACCGAGACTATCGCC-CGCTCCGCTAG 8227
|| ||| | ||| ||||||||||||||||||||||| | |||| ||||| ||
Sbjct 333 AGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCA-CGCCGCGCTCTGCCTC 275
Query 8228 CTGGCAAGACCTGGCTAACGCCGCTAACTGGAACCGTGTAGTCGACCGTAAGCATGTTCC 8287
|||||| || ||||| ||| | ||||||||||| || | || || ||||| | ||
Sbjct 274 CTGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCAAGCACATCCC 215
Query 8288 AATTGCATTCCTGGTAACTGGCGT 8311
|| || |||||||| ||||| ||
Sbjct 214 GATCGCCTTCCTGGTTACTGGTGT 191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136673334741756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |