Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq25106 107 3e-18
seq5292 107 3e-18
seq16393 105 9e-18
seq10995 105 9e-18
seq4839 105 9e-18
seq16981 104 3e-17
seq9903 95.1 2e-14
>seq25106
Length=2841466
Score = 107 bits (118), Expect = 3e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1550999 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1551058
Query 8718 CCCGACGAGGAGCAGAG 8734
||||||| |||| ||||
Sbjct 1551059 CCCGACGGGGAGAAGAG 1551075
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 1550999 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1551058
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 1551059 CCCGACGGGGAG 1551070
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| |||||||||
Sbjct 1551070 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1551011
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 1551010 TACTAACGAGGA 1550999
>seq5292
Length=1841388
Score = 107 bits (118), Expect = 3e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712
|||| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||
Sbjct 1751585 CTTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 1751526
Query 8713 GATTCCCCGACGAGGAG 8729
|||||||||||| ||||
Sbjct 1751525 GATTCCCCGACGGGGAG 1751509
Score = 100 bits (110), Expect = 4e-16
Identities = 71/80 (89%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
|||| | ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||
Sbjct 1751588 TAACTTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 1751529
Query 11781 TTCGATTCCCCGACGAGGAG 11800
||||||||||||||| ||||
Sbjct 1751528 TTCGATTCCCCGACGGGGAG 1751509
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1751509 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1751568
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 1751569 TACTAACGAGGA 1751580
>seq16393
Length=3353470
Score = 105 bits (116), Expect = 9e-18
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 1449851 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1449792
Query 8717 CCCCGACGAGGAGCAG 8732
|||||||| |||| ||
Sbjct 1449791 CCCCGACGGGGAGAAG 1449776
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1449850 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1449791
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 1449790 CCCGACGGGGAG 1449779
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1449779 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1449838
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 1449839 TACTAACGAGGA 1449850
>seq10995
Length=612262
Score = 105 bits (116), Expect = 9e-18
Identities = 73/82 (89%), Gaps = 3/82 (4%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 448037 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 447978
Query 8717 CCCCGACGAGGAG---CAGAGG 8735
|||||||| |||| ||||||
Sbjct 447977 CCCCGACGGGGAGGCACAGAGG 447956
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 448036 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 447977
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 447976 CCCGACGGGGAGG 447964
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 447965 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 448024
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 448025 TACTAACGAGGA 448036
>seq4839
Length=4080137
Score = 105 bits (116), Expect = 9e-18
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 518159 AGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 518218
Query 11787 TCCCCGACGAGGAGG 11801
||||||||| |||||
Sbjct 518219 TCCCCGACGGGGAGG 518233
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 515558 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 515617
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 515618 CCCGACGGGGAG 515629
Score = 104 bits (114), Expect = 3e-17
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 518158 TAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 518217
Query 8715 TTCCCCGACGAGGAG 8729
|||||||||| ||||
Sbjct 518218 TTCCCCGACGGGGAG 518232
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 515558 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 515617
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 515618 CCCGACGGGGAGG 515630
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 515629 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 515570
Query 139413 TACTAACGAGGAT 139425
|||||||||||||
Sbjct 515569 TACTAACGAGGAT 515557
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||
Sbjct 518235 CACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 518176
Query 139410 CTATACTAACGAGGA 139424
|||||||||||||||
Sbjct 518175 CTATACTAACGAGGA 518161
>seq16981
Length=910028
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 870 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 811
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 810 CCCCGACGGGGAGG 797
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 869 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 810
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 809 CCCGACGGGGAG 798
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 798 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 857
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 858 TACTAACGAGGA 869
>seq9903
Length=2515388
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||| ||||||||||||| ||| | |||| ||||| | ||||||||||||||||||||
Sbjct 450039 GTCCTCATTAGTATAGTGGTGAGTGTCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 450098
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 450099 CCCCGACGGGGAGG 450112
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||| ||||||||||||| ||| | |||| ||||| | |||||||||||||||||||||
Sbjct 450040 TCCTCATTAGTATAGTGGTGAGTGTCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 450099
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 450100 CCCGACGGGGAG 450111
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||| | | |||||||
Sbjct 450111 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGACACTCACCACTA 450052
Query 139413 TACTAACGAGGA 139424
|||||| |||||
Sbjct 450051 TACTAATGAGGA 450040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652594164720720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |