Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_025430.1
Length=42351
Score E
Sequences producing significant alignments: (Bits) Value
seq12372 100 8e-17
seq7504 80.6 7e-11
>seq12372
Length=38393
Score = 100 bits (110), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 217 GCCATTCATGCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCA 276
||| || ||| | || | ||||||||| ||||| || | | ||| ||| ||| ||
Sbjct 38303 GCCGTTGATGTCGACAATGATTTCAGTGGTGTAACGCTTGATGCCGTCCTTCTCC---CA 38247
Query 277 CTTGCGCGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCT 336
|| ||| ||||||||| |||||| ||| | | | |||||||||||||||| ||
Sbjct 38246 CTCGCGGGTTTGCAGCTTGCCTTCGATGTAGCATTGGGAACCTTTGCGCAGGTACTCGCC 38187
Query 337 GGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTT 396
|||||| || |||| ||| ||||| | |||||||||||| || || || |||
Sbjct 38186 GGCGATCTCGGCCACCTTGCCGAACAACGACACGCGGTGCCACTCGGTGCGCTCGACCTT 38127
Query 397 CTCCCCTGTCTGCTTATCCTTCCA 420
|| ||| || ||||| || ||||
Sbjct 38126 CTGCCCGGTTTGCTTGTCGGTCCA 38103
>seq7504
Length=9783
Score = 80.6 bits (88), Expect = 7e-11
Identities = 144/206 (70%), Gaps = 7/206 (3%)
Strand=Plus/Minus
Query 217 GCCATTCATGCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCA 276
||| || ||| | || | ||||||||| |||||||| | | ||| | | ||| ||
Sbjct 3118 GCCGTTGATGTCAACGATGATTTCAGTGGTGTAGCGCTTGATGCCGTCTTTTTCC---CA 3062
Query 277 CTTGCGCGTTTGCAGCGCGCCTTCAATGAA-CACCTTGCTG-CCTTTGCGCAGGTACTGG 334
|| || || |||||| |||||| ||| | ||| ||| |||||||||||||||| |
Sbjct 3061 CTCACGGGTCTGCAGCTTGCCTTCGATGTAGCAC--TGCGAACCTTTGCGCAGGTACTCG 3004
Query 335 CTGGCGATTTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTC 394
| ||| || || || | ||| ||||| | ||| ||||||||||| || || |
Sbjct 3003 CCGGCAATCTCAGCAACCTTGCCGAACAGCGACACACGGTGCCATTCGGTACGCTCGACC 2944
Query 395 TTCTCCCCTGTCTGCTTATCCTTCCA 420
|||| || | |||||| || ||||
Sbjct 2943 TTCTGGCCCGACTGCTTGTCGGTCCA 2918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135352216751578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |