Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_025462.1
Length=99730
Score E
Sequences producing significant alignments: (Bits) Value
seq17400 150 1e-31
>seq17400
Length=8471
Score = 150 bits (166), Expect = 1e-31
Identities = 212/296 (72%), Gaps = 4/296 (1%)
Strand=Plus/Minus
Query 19895 GGGTTTGATCAGATTGAGTGGGTTATTAATGAGATTAAAACAAACCCAACATCACGAAGA 19954
|||||||| |||||| ||| | ||||||||||| | ||| || || | ||||| |
Sbjct 4392 GGGTTTGACCAGATTTCCTGGCTAATTAATGAGATCAGAACCAATCCGAATTCACGCCGG 4333
Query 19955 TTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAG--ATGTAGATTTACCACCTTGCC 20012
| || || || || ||||||||| | || | ||| | || | || ||||||||||
Sbjct 4332 CTCATCGTTTCTGGCTGGAATCCTAAAGAAGC--CAGCCAGGTTGCATTGCCACCTTGCC 4275
Query 20013 ATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAA 20072
|||| || ||||| || ||||| || |||| ||||| ||||||||| | || || || |
Sbjct 4274 ATACCCTGTTTCAGTTTTTTGTACAAAATGGCAAATTGTCTTGCCAGCTTTACCAGCGCA 4215
Query 20073 GTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACT 20132
|||| || |||| || ||||| || || |||||||| |||||| | || || ||
Sbjct 4214 GTGCCGATGTATTCCTGGGTGTACCCTTCAATATTGCGAGTTATGCCCTGCTCACTCATA 4155
Query 20133 TAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGAT 20188
| |||| || |||| ||| | |||||||| ||||| ||| || ||||||
Sbjct 4154 TGATTGCTCAAGTCTGTGACCTTCAAGTTGGTGATTTTGTCTGGACCGGGGGTGAT 4099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318891789422363
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |