Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq17400 150 1e-31 >seq17400 Length=8471 Score = 150 bits (166), Expect = 1e-31 Identities = 212/296 (72%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 19895 GGGTTTGATCAGATTGAGTGGGTTATTAATGAGATTAAAACAAACCCAACATCACGAAGA 19954 |||||||| |||||| ||| | ||||||||||| | ||| || || | ||||| | Sbjct 4392 GGGTTTGACCAGATTTCCTGGCTAATTAATGAGATCAGAACCAATCCGAATTCACGCCGG 4333 Query 19955 TTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAG--ATGTAGATTTACCACCTTGCC 20012 | || || || || ||||||||| | || | ||| | || | || |||||||||| Sbjct 4332 CTCATCGTTTCTGGCTGGAATCCTAAAGAAGC--CAGCCAGGTTGCATTGCCACCTTGCC 4275 Query 20013 ATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAA 20072 |||| || ||||| || ||||| || |||| ||||| ||||||||| | || || || | Sbjct 4274 ATACCCTGTTTCAGTTTTTTGTACAAAATGGCAAATTGTCTTGCCAGCTTTACCAGCGCA 4215 Query 20073 GTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACT 20132 |||| || |||| || ||||| || || |||||||| |||||| | || || || Sbjct 4214 GTGCCGATGTATTCCTGGGTGTACCCTTCAATATTGCGAGTTATGCCCTGCTCACTCATA 4155 Query 20133 TAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGAT 20188 | |||| || |||| ||| | |||||||| ||||| ||| || |||||| Sbjct 4154 TGATTGCTCAAGTCTGTGACCTTCAAGTTGGTGATTTTGTCTGGACCGGGGGTGAT 4099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318891789422363