Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_026017.1
Length=41880
Score E
Sequences producing significant alignments: (Bits) Value
seq698 664 0.0
>seq698
Length=3433
Score = 664 bits (736), Expect = 0.0
Identities = 785/1054 (74%), Gaps = 28/1054 (3%)
Strand=Plus/Minus
Query 8913 ATGGCAATTACTACTATTGGCGACATCGTAACTGGCAATATCCCTGTACTGGCGTCTTAC 8972
||| | || || || || || | ||| | || || || ||||| || ||| | || |||
Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171
Query 8973 ATGACTGAAGACCCGGTAGAGAAAACAGCGTTTTTCAACTCCGGCATTCTGACTCCAACT 9032
|||| |||||||||| || || || ||||| ||| | ||||||||||| || |||||
Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111
Query 9033 CCGTATGCTGCTGAGATTGCCCGCGGCCCGTCCAACATTGCCAACCTGCCGTTCTGGAAA 9092
||||| ||||||||||| || ||||||||||| ||||| || ||| | |||| ||||||
Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051
Query 9093 GCTATCGATACCTCTATCGAGCCTAACTATTCGAACGATGTGTATCAGGATATTGCTACC 9152
| ||||| | || ||||||| ||||| |||||||||||||| || | ||
Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991
Query 9153 CCGCGCGCTATCCAGACCGGGGAAATGATGGCCCGCGTTGCGTATCTGAACGAAGGTTTT 9212
|||||| || | ||||| || ||| ||||||| |||||||| || ||||||||||||
Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931
Query 9213 GGTCAGGCTGACCTTACTGTCGAACTGACTAGTCAGAACCCGTTACAGTCCGTAGCCTCT 9272
|| ||||| ||||| |||||||| ||||| || |||||||| | || ||||| || ||
Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871
Query 9273 CGTCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGTCTTATTGCTACCGCCCTGGGC 9332
|| ||||||||||||||||||||||||||||||||||| || | || ||| | |||||
Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811
Query 9333 CTGTACAACAACAACGTATCCGCTGATGATGATTACCACAAGAAGGGCGACATGGTGGTC 9392
| |||||| ||||| | ||| ||||| | ||| | || |||||||||| ||
Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751
Query 9393 GATGTGCCTGCAAATAAAGGCTTCGACGCAGGCGCATTCATCGACGCTACCCAGACTATG 9452
|| || | || | || ||||| || ||||| ||||||||||| |||||||| |||
Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691
Query 9453 GGTGACGCGTTGATGGG---TGGCAGTGGTGAGGTTCTCGGTGCTATCGCGATGCACAGC 9509
||||| ||||||||||| |||| || |||| ||||| | || ||| |||| |||
Sbjct 690 GGTGATGCGTTGATGGGGACTGGC---GGCCAGGTGCTCGGCGTCATGGCGGTGCATAGC 634
Query 9510 TTTGTATACGC--ACAGGCCCGTAAAGCCCAGCTTATCGACTTCATCCGTGATGCCGAGA 9567
|| || || | ||| || |||| ||| | ||||||||||||||||| || || |
Sbjct 633 TTCGTGTATGGCGACATGC--GTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACA 576
Query 9568 ACAACACCATGTTTGCCACCTACCAGGGTTATCGC---GTTATCGTTGACGACAGCATGA 9624
|||||||| | | || ||||||||||| || ||| || |||| |||| ||| ||||
Sbjct 575 ACAACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGAC--CAG-ATGA 519
Query 9625 CCGTAGTTGG-TCAGGACACTAGCCGTAAATTCATCTCCATCATCTTCGGGCAAGGTGCT 9683
|||| | || | || || | || || |||||| | | ||||| || || ||||||
Sbjct 518 CCGTGATCGGCACCGGCAGCTCG-CGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCT 460
Query 9684 ATCGGTTACGGTGAAGGCAACC-----CGTCCAACCCGCTGGAATACGAGCGCGAAGCGT 9738
|||||||||||||||||| || | ||||||| | ||||||||| ||| |
Sbjct 459 ATCGGTTACGGTGAAGGCTCCCCTGAGCATCCAACC-----GCCTACGAGCGCCAAGAGG 405
Query 9739 CCCGCGGCAACGGTGGCGGTGTTGAAACCCTGTGGACTCGTAAGACCTGGTTGCTGCACC 9798
| ||||| ||||||||||| |||||| ||||||| || ||||||||| |||||||||
Sbjct 404 CTCGCGGTAACGGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACC 345
Query 9799 CGTTCGGCTACAGCTTCACCAGCGCAGTAATCACCGGCAATAGCACTGAGACTACTCCGC 9858
|| |||||||||| ||| || ||||||||||| |||| ||||| || ||||
Sbjct 344 CGCTCGGCTACAGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGC 285
Query 9859 GCTCCGCTTCCTGGCAGGACCTGGCAAACGCTACCAACTGGAAACGTGTAGTAGACCGTA 9918
|||| || ||||||||||| ||||| || ||||||||||| || || | || || |
Sbjct 284 GCTCTGCCTCCTGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCA 225
Query 9919 AGCATGTGCCAATTGCGTTCCTGGTAACTGGCGT 9952
|||| | || || || |||||||| ||||| ||
Sbjct 224 AGCACATCCCGATCGCCTTCCTGGTTACTGGTGT 191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133845566452852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |