Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_026017.1 Length=41880 Score E Sequences producing significant alignments: (Bits) Value seq698 664 0.0 >seq698 Length=3433 Score = 664 bits (736), Expect = 0.0 Identities = 785/1054 (74%), Gaps = 28/1054 (3%) Strand=Plus/Minus Query 8913 ATGGCAATTACTACTATTGGCGACATCGTAACTGGCAATATCCCTGTACTGGCGTCTTAC 8972 ||| | || || || || || | ||| | || || || ||||| || ||| | || ||| Sbjct 1230 ATGCCTATCACCACGATCGGTAATATCATCACCGGTAACATCCCGGTGCTGACCTCGTAC 1171 Query 8973 ATGACTGAAGACCCGGTAGAGAAAACAGCGTTTTTCAACTCCGGCATTCTGACTCCAACT 9032 |||| |||||||||| || || || ||||| ||| | ||||||||||| || ||||| Sbjct 1170 CTGACCCAAGACCCGGTTGAAAAGACCGCGTTCTTCGAGTCCGGCATTCTCACCCCAACC 1111 Query 9033 CCGTATGCTGCTGAGATTGCCCGCGGCCCGTCCAACATTGCCAACCTGCCGTTCTGGAAA 9092 ||||| ||||||||||| || ||||||||||| ||||| || ||| | |||| |||||| Sbjct 1110 CCGTACGCTGCTGAGATCGCACGCGGCCCGTCGAACATCGCGAACATCCCGTACTGGAAG 1051 Query 9093 GCTATCGATACCTCTATCGAGCCTAACTATTCGAACGATGTGTATCAGGATATTGCTACC 9152 | ||||| | || ||||||| ||||| |||||||||||||| || | || Sbjct 1050 TCGATCGACGCATCCGTCGAGCCGAACTACTCGAACGATGTGTACGCCGACGTGGCAGAG 991 Query 9153 CCGCGCGCTATCCAGACCGGGGAAATGATGGCCCGCGTTGCGTATCTGAACGAAGGTTTT 9212 |||||| || | ||||| || ||| ||||||| |||||||| || |||||||||||| Sbjct 990 CCGCGCAACATTGAAACCGGCGATATGCTGGCCCGTGTTGCGTACCTCAACGAAGGTTTT 931 Query 9213 GGTCAGGCTGACCTTACTGTCGAACTGACTAGTCAGAACCCGTTACAGTCCGTAGCCTCT 9272 || ||||| ||||| |||||||| ||||| || |||||||| | || ||||| || || Sbjct 930 GGCCAGGCCGACCTGACTGTCGAGCTGACCAGCAAGAACCCGCTGCAATCCGTTGCTGCT 871 Query 9273 CGTCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGTCTTATTGCTACCGCCCTGGGC 9332 || ||||||||||||||||||||||||||||||||||| || | || ||| | ||||| Sbjct 870 CGCCTGGACAACTTCTGGCAGCGCCAGGCTCAGCGCCGGCTGTTGGCCACCTCTCTGGGT 811 Query 9333 CTGTACAACAACAACGTATCCGCTGATGATGATTACCACAAGAAGGGCGACATGGTGGTC 9392 | |||||| ||||| | ||| ||||| | ||| | || |||||||||| || Sbjct 810 ATCTACAACGACAACATCGGCGCAACTGATGCGTTCCATACCCAGAACGACATGGTGATC 751 Query 9393 GATGTGCCTGCAAATAAAGGCTTCGACGCAGGCGCATTCATCGACGCTACCCAGACTATG 9452 || || | || | || ||||| || ||||| ||||||||||| |||||||| ||| Sbjct 750 GACGTTTCCGCTGCTGGCGGTTTCGATGCGGGCGCCTTCATCGACGCGACCCAGACCATG 691 Query 9453 GGTGACGCGTTGATGGG---TGGCAGTGGTGAGGTTCTCGGTGCTATCGCGATGCACAGC 9509 ||||| ||||||||||| |||| || |||| ||||| | || ||| |||| ||| Sbjct 690 GGTGATGCGTTGATGGGGACTGGC---GGCCAGGTGCTCGGCGTCATGGCGGTGCATAGC 634 Query 9510 TTTGTATACGC--ACAGGCCCGTAAAGCCCAGCTTATCGACTTCATCCGTGATGCCGAGA 9567 || || || | ||| || |||| ||| | ||||||||||||||||| || || | Sbjct 633 TTCGTGTATGGCGACATGC--GTAAGAAGCAGATGATCGACTTCATCCGTGACGCTGACA 576 Query 9568 ACAACACCATGTTTGCCACCTACCAGGGTTATCGC---GTTATCGTTGACGACAGCATGA 9624 |||||||| | | || ||||||||||| || ||| || |||| |||| ||| |||| Sbjct 575 ACAACACCCAGATCGCGACCTACCAGGGCTACCGCCTGGTGATCGATGAC--CAG-ATGA 519 Query 9625 CCGTAGTTGG-TCAGGACACTAGCCGTAAATTCATCTCCATCATCTTCGGGCAAGGTGCT 9683 |||| | || | || || | || || |||||| | | ||||| || || |||||| Sbjct 518 CCGTGATCGGCACCGGCAGCTCG-CGCAAGTTCATCAGCGTGATCTTTGGTCAGGGTGCT 460 Query 9684 ATCGGTTACGGTGAAGGCAACC-----CGTCCAACCCGCTGGAATACGAGCGCGAAGCGT 9738 |||||||||||||||||| || | ||||||| | ||||||||| ||| | Sbjct 459 ATCGGTTACGGTGAAGGCTCCCCTGAGCATCCAACC-----GCCTACGAGCGCCAAGAGG 405 Query 9739 CCCGCGGCAACGGTGGCGGTGTTGAAACCCTGTGGACTCGTAAGACCTGGTTGCTGCACC 9798 | ||||| ||||||||||| |||||| ||||||| || ||||||||| ||||||||| Sbjct 404 CTCGCGGTAACGGTGGCGGCGTTGAAGTGCTGTGGAGCCGCAAGACCTGGCTGCTGCACC 345 Query 9799 CGTTCGGCTACAGCTTCACCAGCGCAGTAATCACCGGCAATAGCACTGAGACTACTCCGC 9858 || |||||||||| ||| || ||||||||||| |||| ||||| || |||| Sbjct 344 CGCTCGGCTACAGTTTCCTGTCGGCCACCATCACCGGCAACGGCACCGAGACCACGCCGC 285 Query 9859 GCTCCGCTTCCTGGCAGGACCTGGCAAACGCTACCAACTGGAAACGTGTAGTAGACCGTA 9918 |||| || ||||||||||| ||||| || ||||||||||| || || | || || | Sbjct 284 GCTCTGCCTCCTGGCAGGATCTGGCGCTGGCCACCAACTGGAACCGCGTGATGGAGCGCA 225 Query 9919 AGCATGTGCCAATTGCGTTCCTGGTAACTGGCGT 9952 |||| | || || || |||||||| ||||| || Sbjct 224 AGCACATCCCGATCGCCTTCCTGGTTACTGGTGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133845566452852