Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq19287 116 1e-22
seq17485 107 6e-20
seq5292 104 7e-19
seq4839 102 3e-18
seq30487 98.7 3e-17
seq18404 98.7 3e-17
seq14511 98.7 3e-17
seq13862 98.7 3e-17
>seq19287
Length=754390
Score = 116 bits (128), Expect = 1e-22
Identities = 69/72 (96%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 614996 GCTGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 615055
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 615056 CCGGGTTTCAGC 615067
>seq17485
Length=1084964
Score = 107 bits (118), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1065761 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1065702
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 1065701 CCGGGTTTCAGC 1065690
>seq5292
Length=1841388
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1050356 GCTGAAATAGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1050415
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 1050416 CCTGGTTTCGGC 1050427
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1029320 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 1029379
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 1029380 TCCCGGGTTTCGGC 1029393
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct 1056675 GCCGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAAATCTAAAGGTCCCTGGTTCAATC 1056616
Query 2829 CCGGGCTTCAGC 2840
||| | ||| ||
Sbjct 1056615 CCGAGTTTCGGC 1056604
>seq4839
Length=4080137
Score = 102 bits (112), Expect = 3e-18
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 517623 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 517682
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 517683 TCCCGGGTTTCGGC 517696
>seq30487
Length=1265950
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 866416 GCTGAAATAGCTCAGTTGGGAAAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 866475
Query 2829 CCGGGCTTCAGC 2840
| ||| ||||||
Sbjct 866476 CTGGGTTTCAGC 866487
>seq18404
Length=2812902
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1856565 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1856624
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1856625 CCGGGTTTCGGC 1856636
>seq14511
Length=1646857
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 328099 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 328040
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 328039 CCGGGTTTCGGC 328028
>seq13862
Length=6458357
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 382120 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 382179
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 382180 CCGGGTTTCGGC 382191
Score = 78.8 bits (86), Expect = 3e-11
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831
||| |||||||| ||||| | ||||||||||||||| |||| ||||||||||| | ||||
Sbjct 376557 GAAATAGCTCAGGTGGGAAACCATTAGACTGAAGATTTAAAAGTCCCTGGTTCGATCCCG 376616
Query 2832 GGCTTC 2837
|| |||
Sbjct 376617 GGTTTC 376622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15844275747885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |