Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_026600.1 Length=66181 Score E Sequences producing significant alignments: (Bits) Value seq5325 82.4 3e-11 >seq5325 Length=2151 Score = 82.4 bits (90), Expect = 3e-11 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 12975 GAAATCGAATCGATGATCGTGGATGGAAGAGTGGTGGAAGCAAATCCGGCGCGGCAGCTC 13034 ||| | ||| || || || ||||| | ||||| | ||||||| ||||| |||| || Sbjct 556 GAAGTTGAAGCGGTGGTCATGGATTGCCGAGTGCTTGAAGCAAGCGCGGCGGGGCAATTC 615 Query 13035 CGGATGCCATACATGGAGGCG--GCCTGCCG-GAAGCTGGACCTGGATGAAGCCCAGGCC 13091 |||||||| || || ||||| | |||| | ||||| ||||| | ||| || ||||| Sbjct 616 TGGATGCCAAACGTGCAGGCGTTGATTGCCCTGCAGCTGAACCTGCACGAACCCGAGGCC 675 Query 13092 GTGCAGCGTGATTTTGTCCTTCAT 13115 |||||| | ||| ||||| |||| Sbjct 676 GTGCAGGGGGATCTTGTCGGTCAT 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211575174649406