Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_027130.1
Length=172688
Score E
Sequences producing significant alignments: (Bits) Value
seq30076 91.5 2e-13
seq11692 84.2 2e-11
>seq30076
Length=4501
Score = 91.5 bits (100), Expect = 2e-13
Identities = 111/148 (75%), Gaps = 10/148 (7%)
Strand=Plus/Plus
Query 13230 TCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCGAGT 13289
||| | |||||||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct 3584 TCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAGT 3643
Query 13290 CCAGGTGGAGGAG------TCGGGCGAATAACTCAG--CGGTAGAGTGCCTCCTTTACAC 13341
|||||| | |||| ||||| | || | ||| |||||| | |||| ||||
Sbjct 3644 CCAGGTCGCGGAGCCAATCTCGGG-GTGTAGCGCAGTCCGGTAGCGCGCCTGCTTTGGGA 3702
Query 13342 GGAGATTGTCGGGGGTTCG-ATCCCCTC 13368
| || |||| || ||||| ||||||||
Sbjct 3703 GCAGGATGTCAGGAGTTCGAATCCCCTC 3730
>seq11692
Length=22366
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 13227 CAATCCTCTATAGCTCAGTTGGTAGAGCAGGTGACTGTTAATCACCCTGTCCCTGGTTCG 13286
|| ||| | |||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct 13756 CATTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCG 13815
Query 13287 AGTCCAGGTGGAGGAG 13302
||||||||| | ||||
Sbjct 13816 AGTCCAGGTCGCGGAG 13831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552261498479040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |