Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq556 138 3e-28 >seq556 Length=1149 Score = 138 bits (152), Expect = 3e-28 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 25559 CGATGCAGGAAGCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAGCTGG 25618 ||||||||||||| ||||||||||| || || ||||| |||||||||||||||||| Sbjct 1 CGATGCAGGAAGCTACCGGCAAGGCAGTGAGCGAGACGGTTTCCGAGTTCTCCAAGCTGG 60 Query 25619 CCGACGAACCGGTCAAAGCCT-CGCAGCAACTCAACGAGAAATATCACTACCTGACCGCC 25677 |||| || || || ||||| | ||| || |||||| ||| | |||||||||||||| || Sbjct 61 CCGAAGACCCAGTGAAAGCATCCGCTGC-ACTCAATGAGCAGTATCACTACCTGACTGCT 119 Query 25678 TCGGTTTACGAGCAGATAGCCGCCCTCGATCAGCAAGG 25715 ||||||||| ||||| || || || || || ||||| Sbjct 120 TCGGTTTACTCCCAGATTGCAGCACTGGAGCAACAAGG 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117640278951056