Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_027339.1
Length=38389
Score E
Sequences producing significant alignments: (Bits) Value
seq9203 484 2e-132
>seq9203
Length=13179
Score = 484 bits (536), Expect = 2e-132
Identities = 707/989 (71%), Gaps = 8/989 (1%)
Strand=Plus/Minus
Query 19772 ATATACTTAGGTCTTGATTTTGTTTCTAAGTAAATTCTACCTATATATTCACCGAGAACA 19831
|||||| |||||| |||| || ||| || | || ||||||||||| || |||
Sbjct 11516 ATATACCGCGGTCTTTGTTTTACCTCAGTGTATATGCGCCCGATATATTCACCCAGCACA 11457
Query 19832 CCAATCCCGATCAGTTGCACTCCACCCAAGAAA-AGTATTGATACAAGCAGGGAGGGATA 19890
||||| || |||| ||| | ||||| |||||| || || || || || || || |||||
Sbjct 11456 CCAATACCTATCAATTGAATGCCACC-AAGAAACAGAATGGAGACGAGTAGCGATGGATA 11398
Query 19891 CCCGCGTACTGGGTTACCAAAGACAAGGGTGTCTATAATCATCCATGCACCATATAAAAA 19950
|| | || | ||||| ||| || | || || | ||| | |||||| |||||
Sbjct 11397 ACCAGGCACAGCATTACCCCAGATAACTTTATCAATTACCATGAAGCTACCATACAAAAA 11338
Query 19951 TGAAATGCTTGCAACAAACAAGCCTATATAAGTCCATACGCGAAGAGGAAAGGTTGAAAA 20010
||| | | || |||||||| |||| ||| |||||||| | ||||| | | ||||||
Sbjct 11337 TGAGCAGGTAGCCACAAACAACCCTAAATATGTCCATACTCTTAGAGGTACAGATGAAAA 11278
Query 20011 ACTTGTGATACCTTCCAGTGCCAGATTCCATAATTTCCAGCCATTAAATTTTGAGATGCC 20070
|| || || ||||| | ||||||||||||||||||||||||||||| ||||| ||
Sbjct 11277 GCTGGTTATTCCTTCAATCGCCAGATTCCATAATTTCCAGCCATTAAACTTTGAATCCCC 11218
Query 20071 AGCAACACGCTCTGCGCGTACA-TATTCAACGACATCCGTCTGACCACCCACCCAGCTCA 20129
|||| | ||||| | || | |||||||| | || | | || | |||| ||
Sbjct 11217 AGCAGACCTTTCTGCTC-TAGAGTATTCAACCAGTTCAATATTTCCGCTTGCCCATGACA 11159
Query 20130 GTATGCCTTTCATGAAAAGATTGCGCTCAGGCAACAGTTTAATGTTCTCCACAACCTCAC 20189
||| |||||||| || | |||||||||||||| ||| |||| || || || |||| |
Sbjct 11158 ATATCCCTTTCATAAACAAATTGCGCTCAGGCAGCAGCTTAACATTTTCGACTGCCTCTC 11099
Query 20190 GAGACATGAGTCGAAAATCTCCGACATTTTCCTCGATCTTTGGGGTGCTTATTTTGTTGT 20249
||||| ||||| ||||| || ||||| || || || | || || || ||||| ||||
Sbjct 11098 TTGACATTAGTCGGAAATCACCTACATTCTCTTCAATTCTCGGCGTACTGATTTTATTGT 11039
Query 20250 GTAATTTATAGAACCACTCAGCTGTCTTACGTTTCAGTCGTCCATCAGTTGAGCGGTCTG 20309
| || |||| |||||||| ||||| || | ||||| | || | ||||| || |
Sbjct 11038 GGCATCTATAAAACCACTCGGCTGTTTTCCTTTTCAACCAGTTTTCTTTAGAGCGATCAG 10979
Query 20310 AACGTTTAGCAAGCACCATGTCAGCACCTGCCTGCCACTTTTCAATAAGATGAGGGATAA 20369
||| || || | ||| | ||||| ||| |||||| ||| |||||| | || || |
Sbjct 10978 TACGCTTGGCTAACACTACATCAGCCCCTAACTGCCATTTTCTAATAAGCTCTGGAATTA 10919
Query 20370 CCTCAATTGGGTCTTGCAGGTCGACATCAATAGGAATTACAGCATCGCCGCTTGCATGGT 20429
| ||||| || || || || || |||||||| |||||||||||||| || | |||| |
Sbjct 10918 CTTCAATGGGATCCTGAAGATCTACATCAATTGGAATTACAGCATCTCCAGTCGCATATT 10859
Query 20430 CTAACCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTGTAAATGACAGCGGAACAA 20489
||| || ||||||| ||||| |||||||| || || || || || |||| | |
Sbjct 10858 CTATACCAGCAAATAGCGCTGGCTCTTTACCGAAATTTCGGGTGAAGCTTAGCGCCATCA 10799
Query 20490 CTAGCGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTGTGGCATCTTTACTTCCGT 20549
|||| |||| | || |||||||| ||||||| ||||| | ||| ||||
Sbjct 10798 CTAGACAATCTGCAGTCGCATATTTATTAATAATCAACTCTGTTGCATCGTGACTACCGT 10739
Query 20550 CATTTATGAATACAATTTCTACTTCATA-TGGCTTCAACTCTTGGAATTCACGTACCGTT 20608
|||||||||| | |||||||||||||| | || ||||||||| | |||||| || | |
Sbjct 10738 CATTTATGAAGATTATTTCTACTTCATACTCGC-TCAACTCTTTGTTTTCACGAACGGCT 10680
Query 20609 TTATAGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGAACGACAAGAGATATTTTC 20668
|||||||| | |||||| || |||||||||||||| ||||| || || | |||||||||
Sbjct 10679 TTATAGAAGATAGGTATTGCATCTTCTTCATTGAAAACAGGTACAACCAATGATATTTTC 10620
Query 20669 ATTTCGCATCCCTAAAGACAATGAACTTTGAATAGACGAAACCGCAC-ACCAGACTGATG 20727
|||| ||| |||| ||||| | ||||| || | ||| || ||| | || || ||
Sbjct 10619 ATTTTTTATCTTTAAAAACAATCAGTTTTGAGTAAAAGAATCC-CACAATCAAGCTAATT 10561
Query 20728 GCGGAGAAGGTGATAAGAGTGACTATTGG 20756
|| || || || || || || | |||||
Sbjct 10560 GCAGAAAATGTTATCAGCGTTAAAATTGG 10532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122678440778006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |