Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq28354 98.7 2e-15 seq15900 86.0 1e-11 >seq28354 Length=5615 Score = 98.7 bits (108), Expect = 2e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 210931 GGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTCAAGACCGTTGCATTA 210990 ||||||||| ||||||||||||| | | |||||| ||||||||||||||| ||||||| Sbjct 745 GGTGAGATTCGAACTCACGGAGGGCGTGAACCCTCGTCGGTTTTCAAGACCGGTGCATTA 804 Query 210991 AACCGCTCTGCCAC 211004 |||||||||||||| Sbjct 805 AACCGCTCTGCCAC 818 >seq15900 Length=5631 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 209108 TTGGCAGTGAGTGTGGGATTCGAACCCACGATACGCTTTCGCATATGCTACCTTAGCAGG 209167 ||||| ||||| | ||||||||||||| |||||| || | | ||||| |||||||||| Sbjct 2739 TTGGCGGTGAGAGAGGGATTCGAACCCTCGATACAGTTGCCCGTATGCGTCCTTAGCAGG 2798 Query 209168 GTAGTGATTTCAACCACTCATCCAACTCAC 209197 | ||| ||||| ||||||| ||| ||||| Sbjct 2799 GACGTGGTTTCAGCCACTCACCCATCTCAC 2828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113392096251224