Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_027991.1
Length=147303
Score E
Sequences producing significant alignments: (Bits) Value
seq6883 143 3e-29
seq3805 134 1e-26
>seq6883
Length=1082
Score = 143 bits (158), Expect = 3e-29
Identities = 178/241 (74%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 58102 CGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGT 58161
|||||| || ||||| |||||||||||||||| || ||| | || || || |||||
Sbjct 247 CGGCTGCAAGGCGGGTTTGGTATTCAACCCGGCTACTCCGTTGAGCGTGCTTGAGTACGT 188
Query 58162 CATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTC 58221
|||||||| | || || || |||||||| ||| ||||||||||||||||| |||
Sbjct 187 GATGGACAAGGTCGACATGGTCTTGCTGATGAGCGTCAACCCAGGCTTCGGCGGGCAGAA 128
Query 58222 TTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGT-CGCCGCATTGATGCGTCCG 58280
|| || || || || | || ||||| || | ||| ||| | || |||||||| |
Sbjct 127 GTTCATCCCTGGTACTTTGAACAAGCTGCGTGAGGCCCGTGCGCTG-ATCGATGCGTCGG 69
Query 58281 GTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCG 58340
| |||||||||||||| | |||||||| || || || |||||||| | |||||||
Sbjct 68 GGCGTGACATTCGCCTGGAGATCGACGGCGGGGTCAACGTCAACAATATTCGTGAGATCG 9
Query 58341 C 58341
|
Sbjct 8 C 8
>seq3805
Length=8350
Score = 134 bits (148), Expect = 1e-26
Identities = 186/258 (72%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 58085 CAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTC 58144
|| ||||| || || |||||| || || || ||||| ||||||||||| || ||
Sbjct 7981 CAACTGATCAAGGACGGCGGCTGCAAGGCCGGCCTGGTGTTCAACCCGGCCACCAGTCTG 8040
Query 58145 AGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCA 58204
|| | ||||| |||||||| | || || | ||||||||| ||| ||||||
Sbjct 8041 GACGTCCTGAAATACGTGATGGACAAGGTCGACATGGTGCTGCTGATGAGCGTCAACCCA 8100
Query 58205 GGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGC 58264
|||||||| || ||| || |||||| ||||| || || || || |||| ||| |||
Sbjct 8101 GGCTTCGGTGGTCAGAAGTTCATTCCGGGCACGCTCGACAAGCTACGTGAAGCGCG-CGC 8159
Query 58265 -CGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAA 58323
| || || || ||| ||||||||| |||||| | ||||| ||||| || |||||
Sbjct 8160 GCTGATCGACGCCAGCGGCCGCGACATTCGTCTGGAAATCGACGGTGGCGTCAACGTGAA 8219
Query 58324 CAATATCGGCGAGATCGC 58341
||| ||| ||||||||||
Sbjct 8220 CAACATCCGCGAGATCGC 8237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471060684459240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |