Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq18312 100 4e-16
seq20687 84.2 3e-11
>seq18312
Length=6437
Score = 100 bits (110), Expect = 4e-16
Identities = 279/418 (67%), Gaps = 14/418 (3%)
Strand=Plus/Plus
Query 14017 AATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACC 14076
||||| ||| ||||| || | || ||| ||| || || ||| || ||||||||
Sbjct 1097 AATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACC 1156
Query 14077 TGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGAT 14136
||||| || || || ||| |||| ||| |||||| ||||| |||||||| | |||
Sbjct 1157 GGGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGAT 1216
Query 14137 GCC--CGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCG 14194
||| ||| || | || ||||| |||||||| || | || |||| ||| || ||
Sbjct 1217 GCCATCGT-TCATC-TCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCA 1274
Query 14195 CGTTCATCATT---CGCAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATT 14251
|| || || | | | ||| ||| |||| || || ||||||||||| ||
Sbjct 1275 CGCTCGTCGTGGCCCCCGCCCATGCCA---GCACCACGGTGACGGCCGACGGCGTCGATC 1331
Query 14252 TCATCGATGAAAACGATACATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCAC 14310
|| |||||||| | ||| || || | ||| || | || | || || || || ||
Sbjct 1332 TCGTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGCT-CGAACATGTCGCGTAC 1390
Query 14311 TCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGA 14369
| ||||||||||||| || ||||| || || || | | ||||| || | || ||
Sbjct 1391 ACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAGA 1449
Query 14370 AGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427
| || || || | || || || || || ||| || |||||||| || || || ||
Sbjct 1450 ACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1507
>seq20687
Length=1308170
Score = 84.2 bits (92), Expect = 3e-11
Identities = 135/192 (70%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 118434
|||| || |||||| | || ||||||||||| | ||| |||||||| |||| || |
Sbjct 994471 CTGGAGAGCCCTCATAGGTTTCATATGGGCCATACTCCTTGGCCAATTCACAGCTGGCTT 994412
Query 118435 CGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 118494
| | |||| | | ||| || |||||||| || | ||||| | || |||||| |||
Sbjct 994411 CCAAGGCTCCATAATAAATGGTTTCAAAGATCTGCTTATTCAATAACTGGGCCTC--CGG 994354
Query 118495 A--ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552
| ||||| | | | || |||||| |||| || |||||||| || || | ||
Sbjct 994353 ACTCTCAAAAGGGTACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCC 994294
Query 118553 AATTGGGCGATG 118564
||| ||||||||
Sbjct 994293 AATGGGGCGATG 994282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618197774996280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |