Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq18312 109 6e-19 >seq18312 Length=6437 Score = 109 bits (120), Expect = 6e-19 Identities = 300/449 (67%), Gaps = 18/449 (4%) Strand=Plus/Plus Query 9479 ATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCT 9538 |||| ||| || ||||||| || || | || || || ||| || |||||||| Sbjct 1098 ATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACCG 1157 Query 9539 GGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATA 9598 || || || ||||| || |||| ||| ||| || |||||||||||||| | || Sbjct 1158 GGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGATG 1217 Query 9599 CC-TGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCG 9657 || | |||| | || || || ||||||||| || | ||||| | || || || || Sbjct 1218 CCATCGTTCA-TCTCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCACG 1276 Query 9658 TTCATCAT-TCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTC 9714 || || | | | || ||| ||||||| || || || ||||| || ||||| Sbjct 1277 CTCGTCGTGGCCCCCGC---CCATGCCAGCACCACGGTGACGGCCGACGGCGTCGATCTC 1333 Query 9715 ATCAATGAAGACGATGCATGG---TTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTA 9770 || ||||||| |||||| || || || || || || || || | || |||| Sbjct 1334 GTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGC----TCGAACATGTCGCGTA 1389 Query 9771 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATG 9829 |||| |||| || ||||| || ||||| || || |||| | ||||| || | || | Sbjct 1390 CACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAG 1448 Query 9830 AAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9889 || || || || | || || ||||| || ||| || || |||||||| ||||| ||| Sbjct 1449 AACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGGC 1508 Query 9890 TTACCCGCGAGGAGGGCACCTCGTGGAAT 9918 ||| | | || |||| || ||||| Sbjct 1509 GGGCCCACCATCAGCACACCGCGCGGAAT 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583036878888120