Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq18312 109 6e-19
>seq18312
Length=6437
Score = 109 bits (120), Expect = 6e-19
Identities = 300/449 (67%), Gaps = 18/449 (4%)
Strand=Plus/Plus
Query 9479 ATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCT 9538
|||| ||| || ||||||| || || | || || || ||| || ||||||||
Sbjct 1098 ATCTGCTCACGACCCCGAATGTCCGGCAGGCCAACGACGACCTGACGGTCGAAGCGACCG 1157
Query 9539 GGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATA 9598
|| || || ||||| || |||| ||| ||| || |||||||||||||| | ||
Sbjct 1158 GGGCGCAGCAGCGCAGGGTCGAGGACGTCAGGGCGGTTGGTCGCGGCGATGACGATGATG 1217
Query 9599 CC-TGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCG 9657
|| | |||| | || || || ||||||||| || | ||||| | || || || ||
Sbjct 1218 CCATCGTTCA-TCTCGAAGCCGTCCATCTCTACCAGCAACTGGTTGAGGGTCTGCTCACG 1276
Query 9658 TTCATCAT-TCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTC 9714
|| || | | | || ||| ||||||| || || || ||||| || |||||
Sbjct 1277 CTCGTCGTGGCCCCCGC---CCATGCCAGCACCACGGTGACGGCCGACGGCGTCGATCTC 1333
Query 9715 ATCAATGAAGACGATGCATGG---TTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTA 9770
|| ||||||| |||||| || || || || || || || || | || ||||
Sbjct 1334 GTCGATGAAGATGATGCAAGGGGCGTGCTTCTTGGCCTGC----TCGAACATGTCGCGTA 1389
Query 9771 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATG 9829
|||| |||| || ||||| || ||||| || || |||| | ||||| || | || |
Sbjct 1390 CACGGCTGGCACCGACACCGACGAACATTTCAACGAAGTCCGACCCGGAA-ATGGTGAAG 1448
Query 9830 AAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGC 9889
|| || || || | || || ||||| || ||| || || |||||||| ||||| |||
Sbjct 1449 AACGGCACCTTGGCCTCGCCTGCAATAGCCTTGGCCAGCAGGGTCTTACCGGTACCGGGC 1508
Query 9890 TTACCCGCGAGGAGGGCACCTCGTGGAAT 9918
||| | | || |||| || |||||
Sbjct 1509 GGGCCCACCATCAGCACACCGCGCGGAAT 1537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583036878888120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |