Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq25254 98.7 1e-15 >seq25254 Length=16629 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/180 (73%), Gaps = 9/180 (5%) Strand=Plus/Minus Query 139407 AAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGG 139466 ||| ||| ||| || || ||||| ||||| | ||||||||| |||||||| || | ||| Sbjct 10953 AAAGGAGTCATCCATGTCCGGGTCATTAATCAGACCTTTCCAGCCTACAGTAGTACGTGG 10894 Query 139467 TTTCTCAAAATAAACACGCATAACCA---AAAGAAGATTTGGAAATTGTT---TTTGTAC 139520 |||||||||||||||||||||||| | ||||| || ||| || || | || Sbjct 10893 TTTCTCAAAATAAACACGCATAACGATATAAAGAGTATCCTGAACTTTTTCACTCAAGAC 10834 Query 139521 TTCGGCTAAACGTTCGCCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAAGGGCC 139580 || ||| || || | ||||| | |||||| | ||||||||||||||||| || Sbjct 10833 TT---TTAAGCGGTCAGCATATTCATGTGCAGCTACCGTATCATGAATTGAACAAGGCCC 10777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568111411162440