Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_028698.1
Length=41868
Score E
Sequences producing significant alignments: (Bits) Value
seq698 668 0.0
>seq698
Length=3433
Score = 668 bits (740), Expect = 0.0
Identities = 779/1044 (75%), Gaps = 8/1044 (1%)
Strand=Plus/Plus
Query 26523 ACGCCAGTTACCAGGAACGCAATCGGCACATGCTTACGGTCTACTACACGGTTCCAGTTG 26582
|| ||||| |||||||| || ||||| | ||||| || || | || ||||||||||||
Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250
Query 26583 GTGGCGTTAGCCAGGTCTTGCCAGCTGGCGGAGCG-GGCGATAGTCTCAGTACCGTTGCC 26641
||||| ||||| || |||||| ||| ||||| |||| | ||||| || ||||||||
Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCG-TGGTCTCGGTGCCGTTGCC 309
Query 26642 GGTGATTACGGCGCTGGTGAAACGGTAACCGAACGGGTGCAGCAACCAGGTCTTACGAGT 26701
|||||| ||| ||||| ||| |||| ||||||||||| ||||||||| || |
Sbjct 310 GGTGATGGTGGCCGACAGGAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCT 369
Query 26702 CCACAGCGTTTCTACACCACCGCCATTAGCGCGAGATGCTTCACGCTCGTATTCCAACGG 26761
||||||| ||| || || || || ||| |||||| ||| |||||||| | ||
Sbjct 370 CCACAGCACTTCAACGCCGCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGG 429
Query 26762 CATCACGGGGTTTCCTTCGCCGTAGCCGATTGCGCCCTGGCCAAAGATGATGGAGATGAA 26821
| | ||| ||||| ||||| ||||| || ||||| |||||||| | | ||||||
Sbjct 430 ATGCTCAGGGGAGCCTTCACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAA 489
Query 26822 CTTGCGCTGCGCACCCTG-GCCTACTACGGTCATGCTGTCATCAACGATGACGCGATAGC 26880
||||||| | || || | ||| | |||||||| |||||| | | | ||| ||||
Sbjct 490 CTTGCGC-GAGCTGCCGGTGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGC 548
Query 26881 CCTGGTAGGTAGCAAACATGGTGTTGTTCTCAGCATCACGGATGAAGTCGATAAGCTGGG 26940
|||||||||| || | | ||||||||| ||||| ||||||||||||||||| | |||
Sbjct 549 CCTGGTAGGTCGCGATCTGGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCT 608
Query 26941 CTTTACGGGCCTGT--GCGTATACGAAGCTGTGCATTGCGATAGCACCGAGAACCTCACC 26998
|||| || ||| | || |||||||| |||| || || | ||||| |||| ||
Sbjct 609 TCTTAC--GCATGTCGCCATACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCC 666
Query 26999 GCCGTTACCCATTAATGCGTCACCCATAGTCTGAGTAGCATCAATGAAAGCGCCGGCGTC 27058
||| | ||||| || || |||||||| ||||| || || || ||||| ||||| || ||
Sbjct 667 GCCAGTCCCCATCAACGCATCACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATC 726
Query 27059 GAAACCCAGGGTAGCGGAAACGTCCACCACCATGTCGTTCTGCTCGTGATACGCATCAGT 27118
|||||| | |||||||||||| | ||||||||||||||| || ||||||||||
Sbjct 727 GAAACCGCCAGCAGCGGAAACGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGT 786
Query 27119 AGCGGACACGTTGTCGTTGTACAGACCGAGGGCAGTTGCGATAAGACGACGCTGCGCCTG 27178
||| | |||||||||||| | ||| || | || || | || || ||||| |||||
Sbjct 787 TGCGCCGATGTTGTCGTTGTAGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTG 846
Query 27179 ACGCTGCCAGAAGTTATCCAGACGAGACGCTACGGACTGCAACGGATTCTGGCTGGTCAA 27238
|||||||||||||| ||||| |||| || ||||| |||| ||| |||| ||||||||
Sbjct 847 GCGCTGCCAGAAGTTGTCCAGGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAG 906
Query 27239 TTCGACGGTAAGGTCCGCCTGACCAAAGCCTTCGTTCAGGTAGGCAACACGGGCCATCAT 27298
||||| || ||||| ||||| ||||| |||||||| ||||| ||||||||||||| |||
Sbjct 907 CTCGACAGTCAGGTCGGCCTGGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCAT 966
Query 27299 TTCACCAGTCTGAATAGCGCGCGGAGTAGCGATATCCTGATACACATCGTTCGAATAGTT 27358
|| || || | ||| |||||| || | || |||||||||||||| |||||
Sbjct 967 ATCGCCGGTTTCAATGTTGCGCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTT 1026
Query 27359 AGGTTCGATAGAGGTATCGATAGCTTTCCAGAACGGCAGGTTAGCAATGTTTGACGGACC 27418
|| |||| || | ||||| | |||||| |||| | ||| || ||||| ||||| ||
Sbjct 1027 CGGCTCGACGGATGCGTCGATCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCC 1086
Query 27419 GTTAGCAATCTCAGCCGCATACGGGGTAGAGGTGAGGATACCGGAGTCAAAAAACGCGGT 27478
| || |||||||| || |||||||| | |||||| || ||||| || || ||||||||
Sbjct 1087 GCGTGCGATCTCAGCAGCGTACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGT 1146
Query 27479 TTTCTCTACCGGGTCTTCGGTCATATAAGACGCCAGTACAGGGATGTTGCCGGTTACGAT 27538
|| || |||||||||| ||||| || || | ||| || |||||||| ||||| | |||
Sbjct 1147 CTTTTCAACCGGGTCTTGGGTCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGAT 1206
Query 27539 ATCGCCAATAGTGGTAATTGCCAT 27562
|| || || ||||| || | |||
Sbjct 1207 ATTACCGATCGTGGTGATAGGCAT 1230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133807180457980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |