Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_028698.1 Length=41868 Score E Sequences producing significant alignments: (Bits) Value seq698 668 0.0 >seq698 Length=3433 Score = 668 bits (740), Expect = 0.0 Identities = 779/1044 (75%), Gaps = 8/1044 (1%) Strand=Plus/Plus Query 26523 ACGCCAGTTACCAGGAACGCAATCGGCACATGCTTACGGTCTACTACACGGTTCCAGTTG 26582 || ||||| |||||||| || ||||| | ||||| || || | || |||||||||||| Sbjct 191 ACACCAGTAACCAGGAAGGCGATCGGGATGTGCTTGCGCTCCATCACGCGGTTCCAGTTG 250 Query 26583 GTGGCGTTAGCCAGGTCTTGCCAGCTGGCGGAGCG-GGCGATAGTCTCAGTACCGTTGCC 26641 ||||| ||||| || |||||| ||| ||||| |||| | ||||| || |||||||| Sbjct 251 GTGGCCAGCGCCAGATCCTGCCAGGAGGCAGAGCGCGGCG-TGGTCTCGGTGCCGTTGCC 309 Query 26642 GGTGATTACGGCGCTGGTGAAACGGTAACCGAACGGGTGCAGCAACCAGGTCTTACGAGT 26701 |||||| ||| ||||| ||| |||| ||||||||||| ||||||||| || | Sbjct 310 GGTGATGGTGGCCGACAGGAAACTGTAGCCGAGCGGGTGCAGCAGCCAGGTCTTGCGGCT 369 Query 26702 CCACAGCGTTTCTACACCACCGCCATTAGCGCGAGATGCTTCACGCTCGTATTCCAACGG 26761 ||||||| ||| || || || || ||| |||||| ||| |||||||| | || Sbjct 370 CCACAGCACTTCAACGCCGCCACCGTTACCGCGAGCCTCTTGGCGCTCGTAGGCGGTTGG 429 Query 26762 CATCACGGGGTTTCCTTCGCCGTAGCCGATTGCGCCCTGGCCAAAGATGATGGAGATGAA 26821 | | ||| ||||| ||||| ||||| || ||||| |||||||| | | |||||| Sbjct 430 ATGCTCAGGGGAGCCTTCACCGTAACCGATAGCACCCTGACCAAAGATCACGCTGATGAA 489 Query 26822 CTTGCGCTGCGCACCCTG-GCCTACTACGGTCATGCTGTCATCAACGATGACGCGATAGC 26880 ||||||| | || || | ||| | |||||||| |||||| | | | ||| |||| Sbjct 490 CTTGCGC-GAGCTGCCGGTGCCGATCACGGTCATCTGGTCATCGATCACCAGGCGGTAGC 548 Query 26881 CCTGGTAGGTAGCAAACATGGTGTTGTTCTCAGCATCACGGATGAAGTCGATAAGCTGGG 26940 |||||||||| || | | ||||||||| ||||| ||||||||||||||||| | ||| Sbjct 549 CCTGGTAGGTCGCGATCTGGGTGTTGTTGTCAGCGTCACGGATGAAGTCGATCATCTGCT 608 Query 26941 CTTTACGGGCCTGT--GCGTATACGAAGCTGTGCATTGCGATAGCACCGAGAACCTCACC 26998 |||| || ||| | || |||||||| |||| || || | ||||| |||| || Sbjct 609 TCTTAC--GCATGTCGCCATACACGAAGCTATGCACCGCCATGACGCCGAGCACCTGGCC 666 Query 26999 GCCGTTACCCATTAATGCGTCACCCATAGTCTGAGTAGCATCAATGAAAGCGCCGGCGTC 27058 ||| | ||||| || || |||||||| ||||| || || || ||||| ||||| || || Sbjct 667 GCCAGTCCCCATCAACGCATCACCCATGGTCTGGGTCGCGTCGATGAAGGCGCCCGCATC 726 Query 27059 GAAACCCAGGGTAGCGGAAACGTCCACCACCATGTCGTTCTGCTCGTGATACGCATCAGT 27118 |||||| | |||||||||||| | ||||||||||||||| || |||||||||| Sbjct 727 GAAACCGCCAGCAGCGGAAACGTCGATCACCATGTCGTTCTGGGTATGGAACGCATCAGT 786 Query 27119 AGCGGACACGTTGTCGTTGTACAGACCGAGGGCAGTTGCGATAAGACGACGCTGCGCCTG 27178 ||| | |||||||||||| | ||| || | || || | || || ||||| ||||| Sbjct 787 TGCGCCGATGTTGTCGTTGTAGATACCCAGAGAGGTGGCCAACAGCCGGCGCTGAGCCTG 846 Query 27179 ACGCTGCCAGAAGTTATCCAGACGAGACGCTACGGACTGCAACGGATTCTGGCTGGTCAA 27238 |||||||||||||| ||||| |||| || ||||| |||| ||| |||| |||||||| Sbjct 847 GCGCTGCCAGAAGTTGTCCAGGCGAGCAGCAACGGATTGCAGCGGGTTCTTGCTGGTCAG 906 Query 27239 TTCGACGGTAAGGTCCGCCTGACCAAAGCCTTCGTTCAGGTAGGCAACACGGGCCATCAT 27298 ||||| || ||||| ||||| ||||| |||||||| ||||| ||||||||||||| ||| Sbjct 907 CTCGACAGTCAGGTCGGCCTGGCCAAAACCTTCGTTGAGGTACGCAACACGGGCCAGCAT 966 Query 27299 TTCACCAGTCTGAATAGCGCGCGGAGTAGCGATATCCTGATACACATCGTTCGAATAGTT 27358 || || || | ||| |||||| || | || |||||||||||||| ||||| Sbjct 967 ATCGCCGGTTTCAATGTTGCGCGGCTCTGCCACGTCGGCGTACACATCGTTCGAGTAGTT 1026 Query 27359 AGGTTCGATAGAGGTATCGATAGCTTTCCAGAACGGCAGGTTAGCAATGTTTGACGGACC 27418 || |||| || | ||||| | |||||| |||| | ||| || ||||| ||||| || Sbjct 1027 CGGCTCGACGGATGCGTCGATCGACTTCCAGTACGGGATGTTCGCGATGTTCGACGGGCC 1086 Query 27419 GTTAGCAATCTCAGCCGCATACGGGGTAGAGGTGAGGATACCGGAGTCAAAAAACGCGGT 27478 | || |||||||| || |||||||| | |||||| || ||||| || || |||||||| Sbjct 1087 GCGTGCGATCTCAGCAGCGTACGGGGTTGGGGTGAGAATGCCGGACTCGAAGAACGCGGT 1146 Query 27479 TTTCTCTACCGGGTCTTCGGTCATATAAGACGCCAGTACAGGGATGTTGCCGGTTACGAT 27538 || || |||||||||| ||||| || || | ||| || |||||||| ||||| | ||| Sbjct 1147 CTTTTCAACCGGGTCTTGGGTCAGGTACGAGGTCAGCACCGGGATGTTACCGGTGATGAT 1206 Query 27539 ATCGCCAATAGTGGTAATTGCCAT 27562 || || || ||||| || | ||| Sbjct 1207 ATTACCGATCGTGGTGATAGGCAT 1230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133807180457980