Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq25254 125 7e-24 >seq25254 Length=16629 Score = 125 bits (138), Expect = 7e-24 Identities = 218/306 (71%), Gaps = 12/306 (4%) Strand=Plus/Minus Query 129147 AGTAGAATTTTTGAATCCAACAGCCATAGGTAATCCTGAAGCAATTTCACGATGGGTCTG 129206 |||| |||||| || || |||| || || || |||| ||||||||||||||||| Sbjct 11169 AGTACCATTTTTAAAACCTACAGGTGAAGACAAGCCGGAAGACATTTCACGATGGGTCTG 11110 Query 129207 TGATTCTGTAGTACGAGCACCAATAGC-GACCCAACTAAA--AATACCTGATAG-ATACT 129262 |||||||||||| ||||| ||||| |||| || ||| | | |||||| || | Sbjct 11109 GCTTTCTGTAGTACGTGCACCGATAGCAGACC--ACGAAATCAGGTCTTGATAGTATTGT 11052 Query 129263 TAATAGTAAATGGGTCCAAGACCTCTGTCGCCAAAGGAAGTCCAAGATTCAATA-GTTCT 129321 ||| || || | | ||||||| || |||| | || |||| || |||| Sbjct 11051 GGCGAGTTC--GGATCAAGGGCCTCTGTTGCACAAGGTAAACCTTT-TTCATTAAGTTCA 10995 Query 129322 AAACAGAGATGGCGGGCAATTCTTA-ACCCTTCATCAATATTAAAAGAACCATTTAATTC 129380 | | || |||||| |||| | | |||||| ||||||||||| || ||| | || Sbjct 10994 AGTAACAGCTGGCGGCCAATACGAAGACCCTTT-TCAATATTAAAGGAGTCATCCATGTC 10936 Query 129381 TGGGTCGTTGACTAGGCCTTTCCAACCTACAGTTGTGCGTGGTTTTTCAAAATAAACCCG 129440 ||||| || | || |||||||| |||||||| || |||||||| ||||||||||| || Sbjct 10935 CGGGTCATTAATCAGACCTTTCCAGCCTACAGTAGTACGTGGTTTCTCAAAATAAACACG 10876 Query 129441 CATAAC 129446 |||||| Sbjct 10875 CATAAC 10870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518037842414520