Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_028898.1
Length=35764
Score E
Sequences producing significant alignments: (Bits) Value
seq26652 488 1e-133
>seq26652
Length=3114
Score = 488 bits (540), Expect = 1e-133
Identities = 845/1212 (70%), Gaps = 26/1212 (2%)
Strand=Plus/Minus
Query 24397 TGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGATT 24456
|||| || |||||||| |||||||||| ||| |||| ||| ||| ||||||| ||
Sbjct 2719 TGTACTAGCTCAAACCTGATCTGACAGTTACCCATTTTTTATT---GTGCCTGTCAGGTT 2663
Query 24457 AA-TTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATC 24515
|| |||||||| |||||||| || ||||||||||||||||||||||||| ||| | |
Sbjct 2662 AAATTTGAGCT-AAATTCTTCTCAGCCCAAATCCGTTTTCCATCAAGTAAAGTTTCAAGT 2604
Query 24516 GGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAAC 24575
||||| | ||||||||||||||||||||||| || || | |||||| | | | |
Sbjct 2603 GGTGTACGACCACAGCACATTTTTCCTTGATGAGTACGTTCAGTATTATAGAATTTCAGC 2544
Query 24576 CACTCATCTAAATCCGCTTGTAATGTCGTTAAATCCG-TATAAATTTTCTTCCTAAATGC 24634
|| || |||| ||| |||||||| || | ||| | |||||| ||||||||||| |
Sbjct 2543 CAATCGTCTAGATCAACTTGTAAT-TCTTCCAATGAGCTATAAAGCTTCTTCCTAAACGT 2485
Query 24635 CACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTG 24694
| ||| || || || || || || || |||||||| || || ||||| || || || ||
Sbjct 2484 AATTTGATAGAACTCCTGCAAAATCGTCTTATGGAAACGCTCACAGATACCATTTGTTTG 2425
Query 24695 CGGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATA 24754
||| | | || || || |||| ||||||||||| | ||| | ||| | ||||||
Sbjct 2424 CGGCGAAGCTGCTTTTGTCTTCGTGTGATCAATATCATTAACTGCCAGATACAACTCATA 2365
Query 24755 ATCGTGATTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACAT 24814
|| || | ||||||||| || ||||| ||| | |||| ||| || | ||||| | |||
Sbjct 2364 GTCATGTTGTTCTACCTTACCGCAATACTCAGTACCTCTGTCTGTGAGGATGCGAAGCAT 2305
Query 24815 CGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCACT 24874
||||| | || || | || |||| ||||| |||||| || | ||| || || |
Sbjct 2304 TGGTAAGTCCTGAGATTGATAGAATGGCAACACACGATCATTGAGTAAATCAGCCGCTGT 2245
Query 24875 GATAGCGGTCTTCATTGTATAAAGTTTTGCAA---ACGCCACTTTACTGTAAGTATCAAT 24931
|| | || || ||||||| || || |||| ||| || || || ||||| || ||
Sbjct 2244 AATCGGTGTTTTTGTTGTATAGAGCTT-GCAATGAACG--ACCTTGCTATAAGTGTCGAT 2188
Query 24932 AAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTG 24991
|| ||||||||||| || || || || |||||||| || || ||||| || || |||||
Sbjct 2187 GAATGTTTGTTGATAGATTCGTCCAACACCTTTGAGATTCCCGACATAAAAGGTGTCTTG 2128
Query 24992 TGAGCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCACAGGCAATCTCATCTTCTTT 25051
| ||| | |||||| || || || ||||| ||||||||||| |||| ||||| || |
Sbjct 2127 CGCGCCTAAATAGCCTGGATGAGCTGTTTCGATTTCACCACAAGCAACGTCATCCTCATG 2068
Query 25052 CTTACGCTCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAG 25111
|||||| || | || | ||| ||| | | | |||||| | | ||||||
Sbjct 2067 CTTACGTTCAAGTGCCGCAATCTGCTGATCATTTAATTCAATACCATCCTGTGCAAC--- 2011
Query 25112 TTT---TTCCAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAACCAAAT 25168
||| || || || |||| | | |||||| || | | || |||||| | ||| ||
Sbjct 2010 TTTAGCCTCAAGTGCTTTTAAACGCTTCTTAAAGTTTTCTAAATCATGACGAAGCCATAT 1951
Query 25169 CGAACGTACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCGTTACTCACTCT 25228
|| || || || | ||||||| || | || | || || | ||| |||||| |
Sbjct 1950 AGAGCGAACCCCACTCCCTGAAACGAATACACCCTTCTTGCGTAATTCATTACTCGTACG 1891
Query 25229 TACCTGTCCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTATTGCCTC 25288
||| ||| |||| || | | || || || | | |||||| || || | | ||
Sbjct 1890 GTGCTGACCATATGCGGGATATTGAATTGCGAAATCAATAACAGCCTGTTCAGTAGTATC 1831
Query 25289 ATCAACACGATTTTTTAAGTTGGGAACGCGTCTATTTTGATTCAGCAATGCTTCAACACC 25348
||| ||||| |||||||| || || || || | | ||| | || ||| |||| | |
Sbjct 1830 ATCTACACGGTTTTTTAAATTTGGTACTCGACGGGACTTATTAATCAGTGCGTCAATATC 1771
Query 25349 ACCTTGCTCAACCGCTTGTTGATAACGATAGAATGTATCTCGGCTCATTCCCATTACTTT 25408
||| || || || ||||| ||||| |||||||||| | ||||| |||||
Sbjct 1770 ACCAGACTTCACTAATTCCTGATAGCGATAAAATGTATCTCTTGAAACCCCCATCACTTT 1711
Query 25409 GCAGGCTTGAGAAATATTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTT 25468
||| ||| || | ||| || ||||| |||||||| | | ||| ||||||||
Sbjct 1710 GCATGCTCTGGATACATTCTGAAGCTCTTCAGCTAAATTAAGCAGACCTACTTTGTGTTT 1651
Query 25469 AATGAGAGGGTTGTTAGAATAAAACAT--GAGAGTTTCCTTTTTGTTTAGATTGA-TTTT 25525
||||| | ||||||| || ||||| || |||| || ||||||| |||| | |||
Sbjct 1650 AATGATTTGATTGTTAGTATGCAACATAAGAAAGTTACC--TTTGTTT-GATTAAGATTT 1594
Query 25526 TGACACTCATATTCTAAACGGGAAACTCTCACTTTTTAGAGTGAATTGTCAGATCAAGTC 25585
||||| | | || ||| ||| |||| || |||||| || | ||| |||||||||
Sbjct 1593 CGACAC-CTTTATCAAAATGGGTAACTTTCTCTTTTTCAAGAAGAATGTACGATCAAGTC 1535
Query 25586 TGATCTTCTACA 25597
||| || ||||
Sbjct 1534 TGAACTAATACA 1523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114281504399756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |